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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS11235 and DDA3937_RS11240 are separated by 65 nucleotides
DDA3937_RS11240 and DDA3937_RS11245 are separated by 205 nucleotides
DDA3937_RS11245 and DDA3937_RS11250 are separated by 47 nucleotides
DDA3937_RS11250 and DDA3937_RS11255 are separated by 147 nucleotides
DDA3937_RS11235: DDA3937_RS11235 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB, at 2,553,178 to 2,553,879
_RS11235
DDA3937_RS11240: DDA3937_RS11240 - ATP-dependent DNA helicase, at 2,553,945 to 2,555,864
_RS11240
DDA3937_RS11245: DDA3937_RS11245 - RidA family protein, at 2,556,070 to 2,556,417
_RS11245
DDA3937_RS11250: DDA3937_RS11250 - YoaH family protein, at 2,556,465 to 2,556,656
_RS11250
DDA3937_RS11255: DDA3937_RS11255 - aminodeoxychorismate synthase component 1, at 2,556,804 to 2,558,174
_RS11255
Group
Condition
DDA3937
_RS11235
DDA3937
_RS11240
DDA3937
_RS11245
DDA3937
_RS11250
DDA3937
_RS11255
plant
Stem-Atlantic
N.D.
-0.2
-0.5
-0.6
+0.0
carbon source
M9+glycerol
N.D.
-0.2
-0.2
-1.0
+0.2
plant
Stem-Atlantic
N.D.
-0.1
-0.1
-0.9
+0.1
stress
3.75mM_PTB
N.D.
-0.2
-0.0
-0.8
+0.1
carbon source
M9+glucose+arginine
N.D.
+0.1
+0.4
-1.1
-0.4
plant
Stem-Norland
N.D.
-0.2
-0.2
-0.8
+0.3
carbon source
M9+glycerol
N.D.
-0.1
-0.7
-0.4
+0.2
control
LB
N.D.
-0.2
-0.6
-0.2
+0.1
plant
Atlantic
N.D.
-0.3
-0.5
-0.4
+0.4
control
LB
N.D.
-0.2
-0.4
-0.4
+0.3
plant
Stem-Norland
N.D.
-0.1
-0.4
-0.5
+0.3
plant
Stem-Atlantic
N.D.
+0.0
+0.4
-0.6
-0.4
control
LB
N.D.
-0.2
-0.3
-0.2
+0.3
carbon source
M9+glycerol
N.D.
-0.1
-0.8
-0.1
+0.5
plant
Upstate
N.D.
-0.3
+0.4
-0.4
-0.1
plant
Upstate
N.D.
-0.3
+0.4
-0.3
-0.1
carbon source
M9+glycerol
N.D.
-0.2
+0.2
+0.2
-0.5
control
PDB
N.D.
-0.0
+0.8
-0.3
-0.6
plant
Norland
N.D.
-0.1
+0.9
-0.2
-0.5
carbon source
M9+starch
N.D.
+0.1
+0.3
-0.5
+0.2
carbon source
M9+polygalacturonate
N.D.
+0.0
+0.4
-0.4
+0.2
plant
Stem-Norland
N.D.
-0.3
+0.0
+0.4
+0.2
control
PDB
N.D.
+0.2
+0.2
+0.7
-0.4
control
PDB
N.D.
-0.2
+0.4
+0.4
+0.0
plant
Atlantic
N.D.
-0.3
+0.3
+0.7
+0.1
carbon source
M9+glucose
N.D.
+0.3
+0.2
+0.5
-0.1
plant
Stem-Norland
N.D.
-0.2
+0.2
+0.5
+0.4
control
PDB
N.D.
-0.1
+0.5
+0.4
+0.7
plant
Norland
N.D.
-0.0
+1.3
+0.2
+0.1
plant
Norland
N.D.
-0.1
+0.9
+1.1
+0.2
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DDA3937_RS11245
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