Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS11035 and DDA3937_RS11040 are separated by 928 nucleotidesDDA3937_RS11040 and DDA3937_RS11045 are separated by 369 nucleotidesDDA3937_RS11045 and DDA3937_RS11050 are separated by 261 nucleotidesDDA3937_RS11050 and DDA3937_RS11055 overlap by 14 nucleotides DDA3937_RS11035: DDA3937_RS11035 - redox-regulated ATPase YchF, at 2,488,646 to 2,489,737 _RS11035 DDA3937_RS11040: DDA3937_RS11040 - xylanase, at 2,490,666 to 2,491,907 _RS11040 DDA3937_RS11045: DDA3937_RS11045 - ATP-dependent RNA helicase DbpA, at 2,492,277 to 2,493,650 _RS11045 DDA3937_RS11050: DDA3937_RS11050 - tetratricopeptide repeat protein, at 2,493,912 to 2,494,463 _RS11050 DDA3937_RS11055: DDA3937_RS11055 - sigma-70 family RNA polymerase sigma factor, at 2,494,450 to 2,495,001 _RS11055
Group Condition DDA3937_RS11035 DDA3937_RS11040 DDA3937_RS11045 DDA3937_RS11050 DDA3937_RS11055
plant Stem-Atlantic -2.1 -0.2 -0.6 -0.1 +0.0
carbon source M9+glucose+arginine -2.7 -0.1 +0.2 +0.1 -0.4
carbon source M9+sucrose -1.8 -0.4 -0.0 -0.2 -0.5
carbon source M9+glucose -2.8 -0.2 +0.4 +0.1 +0.0
carbon source M9+glucose+arginine -2.4 -0.4 +0.2 +0.3 -0.1
plant Stem-Norland -2.5 +0.1 -0.3 -0.0 +0.3
plant Norland -2.0 +0.1 +0.0 -0.2 -0.2
carbon source M9+glucose -2.3 -0.0 -0.1 +0.2 +0.2
plant Stem-Norland -1.7 -0.4 -0.1 -0.0 +0.1
carbon source M9+starch -1.8 -0.1 +0.2 -0.2 -0.2
plant Stem-Atlantic -2.5 +0.3 +0.0 +0.1 +0.0
control LB -2.1 -0.0 +0.0 +0.2 -0.0
carbon source M9+glucose -1.9 -0.1 -0.1 -0.0 +0.2
plant Norland -1.9 +0.0 -0.0 -0.0 +0.1
plant Upstate -1.9 +0.2 -0.4 +0.1 +0.2
plant Upstate -1.6 -0.0 -0.1 +0.2 -0.2
control PDB -1.2 -0.1 +0.2 +0.4 -1.0
plant Atlantic -1.9 +0.1 +0.1 -0.2 +0.2
plant Upstate -2.0 +0.0 -0.1 -0.0 +0.5
carbon source M9+glucose+arginine -1.9 +0.0 +0.5 -0.1 -0.0
plant Norland -1.5 +0.1 +0.1 -0.4 +0.1
plant Atlantic -1.5 -0.1 -0.3 +0.0 +0.3
control PDB -1.2 -1.0 -0.2 +0.3 +0.7
control LB -1.8 +0.0 +0.2 +0.1 +0.2
plant Stem-Atlantic -1.4 +0.0 +0.1 +0.3 -0.3
plant Stem-Atlantic -1.3 -0.2 +0.3 +0.3 +0.1
plant Atlantic -1.4 +0.1 -0.2 +0.1 +0.6
plant Stem-Norland -1.3 +0.4 +0.1 +0.2 -0.1
control PDB -1.2 +0.0 +0.2 +0.6 -0.2
plant Stem-Atlantic -1.3 +0.4 -0.2 +0.5 +0.6
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