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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS10640 and DDA3937_RS10645 are separated by 197 nucleotides
DDA3937_RS10645 and DDA3937_RS10650 are separated by 58 nucleotides
DDA3937_RS10650 and DDA3937_RS10655 are separated by 177 nucleotides
DDA3937_RS10655 and DDA3937_RS10660 are separated by 3 nucleotides
DDA3937_RS10640: DDA3937_RS10640 - Lrp/AsnC family transcriptional regulator, at 2,395,344 to 2,395,808
_RS10640
DDA3937_RS10645: DDA3937_RS10645 - YdgA family protein, at 2,396,006 to 2,397,562
_RS10645
DDA3937_RS10650: DDA3937_RS10650 - mannose-6-phosphate isomerase, at 2,397,621 to 2,398,805
_RS10650
DDA3937_RS10655: DDA3937_RS10655 - class II fumarate hydratase, at 2,398,983 to 2,400,380
_RS10655
DDA3937_RS10660: DDA3937_RS10660 - DNA replication terminus site-binding protein, at 2,400,384 to 2,401,310
_RS10660
Group
Condition
DDA3937
_RS10640
DDA3937
_RS10645
DDA3937
_RS10650
DDA3937
_RS10655
DDA3937
_RS10660
plant
Stem-Atlantic
+0.2
-0.4
-0.7
-0.6
-0.3
control
PDB
-0.1
-1.6
+1.1
-0.0
-1.0
control
PDB
-0.2
-1.5
+0.4
-0.1
-0.0
control
PDB
-0.8
-0.9
-0.1
+0.8
-0.2
plant
Norland
+0.1
-0.6
-0.4
-0.2
-0.1
control
PDB
-0.5
-0.3
+0.5
-0.1
-0.7
control
PDB
-0.1
-1.0
+1.0
-0.2
-0.6
carbon source
M9+glycerol
+0.0
-0.4
+0.5
-0.5
-0.1
carbon source
M9+glycerol
-0.3
-0.5
+0.5
-0.4
+0.1
control
PDB
+0.2
-0.4
+0.1
-0.6
+0.3
carbon source
M9+glycerol
-0.1
-0.8
+0.8
-0.1
+0.1
plant
Stem-Norland
+0.0
-0.3
-0.7
+0.9
-0.1
plant
Stem-Atlantic
-0.4
+0.4
-0.5
+0.3
+0.2
plant
Norland
+0.4
-0.3
+0.4
-0.3
-0.1
carbon source
M9+starch
+0.3
-0.7
+0.7
-0.0
-0.1
stress
1.88mM_PTB
-0.1
+0.2
+0.4
-0.6
+0.1
plant
Stem-Atlantic
-0.4
+0.4
+0.1
+0.3
-0.2
carbon source
M9+sucrose
+0.0
-0.5
+0.7
+0.1
-0.2
carbon source
M9+sucrose
+0.2
-0.3
+0.9
-0.2
-0.3
stress
7.5mM_PTB
+0.0
-0.5
+1.2
-0.3
+0.1
carbon source
M9+starch
+0.3
-0.1
+1.0
-0.2
-0.3
plant
Stem-Atlantic
-0.3
+0.2
-0.1
+0.8
+0.2
stress
7.5mM_PTB
+0.1
-0.0
+1.0
-0.3
+0.1
carbon source
M9+glucose
-0.0
-0.2
+1.2
+0.3
-0.2
stress
7.5mM_PTB
+0.2
-0.1
+1.2
+0.0
-0.1
carbon source
M9+glucose
-0.1
-0.2
+1.4
+0.6
-0.1
carbon source
M9+glucose
+0.2
-0.0
+1.7
+0.2
-0.3
carbon source
M9+glucose+arginine
-0.2
-0.1
+1.7
+0.9
-0.1
carbon source
M9+glucose+arginine
+0.1
-0.3
+1.6
+1.1
-0.3
carbon source
M9+glucose+arginine
+0.1
+0.1
+2.2
+0.6
-0.1
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DDA3937_RS10650
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