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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS09810 and DDA3937_RS09815 overlap by 11 nucleotides
DDA3937_RS09815 and DDA3937_RS09820 are separated by 139 nucleotides
DDA3937_RS09820 and DDA3937_RS09825 are separated by 494 nucleotides
DDA3937_RS09825 and DDA3937_RS09830 are separated by 67 nucleotides
DDA3937_RS09810: DDA3937_RS09810 - hypothetical protein, at 2,214,338 to 2,214,607
_RS09810
DDA3937_RS09815: DDA3937_RS09815 - APC family permease, at 2,214,597 to 2,215,964
_RS09815
DDA3937_RS09820: DDA3937_RS09820 - exodeoxyribonuclease I, at 2,216,104 to 2,217,534
_RS09820
DDA3937_RS09825: DDA3937_RS09825 - DUF496 family protein, at 2,218,029 to 2,218,367
_RS09825
DDA3937_RS09830: DDA3937_RS09830 - hypothetical protein, at 2,218,435 to 2,218,800
_RS09830
Group
Condition
DDA3937
_RS09810
DDA3937
_RS09815
DDA3937
_RS09820
DDA3937
_RS09825
DDA3937
_RS09830
control
PDB
N.D.
-0.2
-0.1
-2.3
-1.0
control
PDB
N.D.
-0.3
-0.5
-1.5
-0.5
control
PDB
N.D.
-1.0
+0.1
-1.2
+0.1
control
PDB
N.D.
-0.5
-0.0
-1.6
+0.2
control
PDB
N.D.
-0.5
-0.5
-1.0
+0.2
carbon source
M9+sucrose
N.D.
-0.0
-0.4
-1.3
+0.1
carbon source
M9+sucrose
N.D.
+0.0
-0.2
-1.6
+0.2
stress
3.75mM_PTB
N.D.
-0.1
-0.4
-0.3
-0.2
control
LB
N.D.
-0.1
-0.2
-0.1
-0.4
stress
3.75mM_PTB
N.D.
+0.0
-0.3
-0.4
-0.1
control
PDB
N.D.
-0.5
-0.1
-0.4
+0.2
stress
3.75mM_PTB
N.D.
+0.1
-0.3
-0.2
-0.3
carbon source
M9+sucrose
N.D.
+0.0
-0.0
-0.8
+0.1
plant
Norland
N.D.
-0.2
-0.4
-0.1
+0.2
plant
Atlantic
N.D.
+0.3
-0.4
-0.2
-0.0
carbon source
M9+starch
N.D.
+0.1
-0.4
-0.2
+0.3
plant
Stem-Norland
N.D.
+0.2
-0.2
-0.3
+0.2
plant
Stem-Norland
N.D.
-0.1
+0.0
-0.3
+0.4
plant
Stem-Atlantic
N.D.
-0.3
-0.2
-0.0
+0.6
carbon source
M9+glucose
N.D.
+0.0
-0.1
-0.2
+0.5
plant
Atlantic
N.D.
-0.3
+0.0
+0.2
+0.3
plant
Norland
N.D.
+0.2
-0.2
-0.2
+0.5
plant
Stem-Norland
N.D.
+0.1
+0.1
-0.3
+0.5
plant
Atlantic
N.D.
+0.1
-0.4
+0.5
+0.2
carbon source
M9+glycerol
N.D.
-0.0
+0.2
-0.2
+0.5
carbon source
M9+glucose
N.D.
-0.2
+0.2
+0.1
+0.5
plant
Atlantic
N.D.
-0.1
+0.0
+0.1
+0.7
carbon source
M9+glucose+arginine
N.D.
-0.1
+0.1
+0.5
+0.3
plant
Atlantic
N.D.
+0.1
+0.1
+0.3
+0.4
plant
Norland
N.D.
+0.3
-0.1
+0.4
+0.5
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DDA3937_RS09820
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