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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS23095 and DDA3937_RS08020 are separated by 98 nucleotides
DDA3937_RS08020 and DDA3937_RS08025 are separated by 186 nucleotides
DDA3937_RS08025 and DDA3937_RS08030 are separated by 166 nucleotides
DDA3937_RS08030 and DDA3937_RS08035 are separated by 221 nucleotides
DDA3937_RS23095: DDA3937_RS23095 - hypothetical protein, at 1,817,810 to 1,818,010
_RS23095
DDA3937_RS08020: DDA3937_RS08020 - CDP-diacylglycerol diphosphatase, at 1,818,109 to 1,818,876
_RS08020
DDA3937_RS08025: DDA3937_RS08025 - LysR family transcriptional regulator, at 1,819,063 to 1,819,962
_RS08025
DDA3937_RS08030: DDA3937_RS08030 - ABC transporter substrate-binding protein, at 1,820,129 to 1,821,667
_RS08030
DDA3937_RS08035: DDA3937_RS08035 - dihydrodipicolinate synthase family protein, at 1,821,889 to 1,822,773
_RS08035
Group
Condition
DDA3937
_RS23095
DDA3937
_RS08020
DDA3937
_RS08025
DDA3937
_RS08030
DDA3937
_RS08035
plant
Upstate
-0.2
-0.1
-0.7
+0.2
-0.1
control
PDB
-0.8
+0.5
-0.3
+0.2
+0.1
control
PDB
-0.1
+0.4
-0.5
+0.4
-0.2
plant
Norland
+0.2
+0.2
-0.4
+0.3
-0.2
plant
Stem-Norland
+0.3
+0.4
-0.4
+0.2
-0.4
carbon source
M9+starch
+0.5
-0.1
-0.2
-0.2
+0.1
control
PDB
-0.3
+0.3
-0.3
+0.7
-0.4
control
PDB
-0.5
+0.0
-0.0
+0.6
-0.0
plant
Stem-Atlantic
+0.3
-0.5
+0.0
+0.1
+0.2
plant
Stem-Atlantic
-0.3
-0.2
+0.0
+0.4
+0.2
carbon source
M9+starch
+0.4
-0.4
+0.1
-0.1
+0.1
plant
Upstate
-0.2
+0.7
-0.4
-0.1
+0.2
plant
Stem-Atlantic
-0.5
+0.3
+0.4
+0.3
-0.1
carbon source
M9+glucose
+0.2
-0.1
+0.2
+0.6
-0.2
plant
Norland
-0.5
+1.0
+0.3
-0.3
+0.2
plant
Stem-Norland
+0.7
+0.0
+0.2
+0.3
-0.5
carbon source
M9+glycerol
-0.3
+0.1
+0.0
+0.7
+0.2
carbon source
M9+glucose
+0.5
+0.1
-0.1
+0.4
-0.1
plant
Stem-Norland
-0.2
+0.5
+0.4
+0.7
-0.5
carbon source
M9+glucose+arginine
+0.4
-0.0
+0.0
+0.5
-0.1
plant
Upstate
+0.4
+0.3
+0.0
+0.3
-0.1
carbon source
M9+glucose+arginine
+0.5
+0.0
+0.2
+0.4
-0.2
plant
Atlantic
+0.4
+0.5
-0.0
+0.3
-0.1
carbon source
M9+glycerol
+0.0
-0.2
+0.2
+0.7
+0.4
carbon source
M9+glycerol
+0.2
-0.1
-0.1
+0.9
+0.2
carbon source
M9+glycerol
-0.1
-0.2
+0.4
+0.8
+0.5
control
PDB
+0.0
+0.8
-0.3
+0.7
+0.1
carbon source
M9+glycerol
-0.1
+0.2
-0.1
+0.9
+0.7
control
PDB
+0.2
+0.3
-0.3
+1.3
+0.2
carbon source
M9+glycerol
+0.1
+0.7
+0.5
+0.6
+0.6
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DDA3937_RS08025
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