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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS07970 and DDA3937_RS07975 are separated by 3 nucleotides
DDA3937_RS07975 and DDA3937_RS07980 overlap by 4 nucleotides
DDA3937_RS07980 and DDA3937_RS07985 are separated by 339 nucleotides
DDA3937_RS07985 and DDA3937_RS07995 are separated by 274 nucleotides
DDA3937_RS07970: DDA3937_RS07970 - ABC transporter substrate-binding protein, at 1,807,892 to 1,808,698
_RS07970
DDA3937_RS07975: DDA3937_RS07975 - ATP-binding cassette domain-containing protein, at 1,808,702 to 1,809,493
_RS07975
DDA3937_RS07980: DDA3937_RS07980 - ABC transporter permease subunit, at 1,809,490 to 1,810,149
_RS07980
DDA3937_RS07985: DDA3937_RS07985 - hypothetical protein, at 1,810,489 to 1,810,881
_RS07985
DDA3937_RS07995: DDA3937_RS07995 - aryl-sulfate sulfotransferase, at 1,811,156 to 1,812,949
_RS07995
Group
Condition
DDA3937
_RS07970
DDA3937
_RS07975
DDA3937
_RS07980
DDA3937
_RS07985
DDA3937
_RS07995
plant
Norland
+0.2
-0.3
-1.3
-1.1
-0.0
carbon source
M9+glycerol
-0.4
-0.3
-0.8
-0.6
+0.1
plant
Stem-Norland
-0.3
-0.6
-0.8
+0.2
-0.3
carbon source
M9+polygalacturonate
+0.0
-0.2
-1.2
-0.5
+0.2
control
PDB
+0.0
+0.4
-1.2
-0.4
-0.4
plant
Upstate
+0.6
-0.4
+0.0
-0.8
-0.3
carbon source
M9+starch
-0.3
+0.4
-0.5
-0.7
+0.3
plant
Upstate
-0.2
+0.3
-0.8
+0.1
-0.2
control
PDB
-0.0
+0.1
-1.4
+0.7
-0.0
plant
Norland
+0.5
+0.1
-0.1
-1.1
+0.0
plant
Upstate
+0.4
-0.6
+0.3
-0.2
-0.2
plant
Stem-Norland
+1.1
+0.1
-1.6
+0.4
-0.2
control
PDB
+0.1
+0.6
-0.4
-1.0
+0.4
plant
Stem-Atlantic
+0.6
-0.6
-0.1
-0.1
+0.1
plant
Norland
+0.4
-0.4
-0.1
-0.3
+0.3
plant
Atlantic
-0.5
+0.5
+0.4
+0.1
-0.0
carbon source
M9+glycerol
+0.3
-0.2
+0.4
-0.3
+0.3
plant
Upstate
-0.4
+0.2
+0.5
-0.2
+0.5
plant
Stem-Norland
+0.4
-0.3
-0.4
+0.6
+0.3
control
PDB
+0.3
-0.1
-0.4
+0.5
+0.4
carbon source
M9+glycerol
+0.3
-0.1
+0.9
-0.4
+0.1
plant
Stem-Atlantic
+0.6
-0.6
-0.1
+0.6
+0.4
plant
Atlantic
+0.2
+0.6
+0.8
-0.2
-0.3
plant
Stem-Atlantic
+0.5
-0.1
+0.1
+0.7
+0.1
plant
Stem-Norland
+0.6
-0.2
+0.8
+0.2
+0.0
plant
Upstate
-0.2
+0.1
+1.7
-0.1
+0.1
plant
Upstate
+0.2
+0.1
+0.7
+0.2
+0.3
plant
Stem-Atlantic
+0.6
+0.3
+1.5
-0.9
+0.2
plant
Norland
+0.0
+1.3
+0.7
-0.5
+0.2
plant
Atlantic
-0.1
+2.3
+0.5
-0.4
-0.2
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