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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS07710 and DDA3937_RS07715 are separated by 171 nucleotides
DDA3937_RS07715 and DDA3937_RS07720 are separated by 106 nucleotides
DDA3937_RS07720 and DDA3937_RS07725 overlap by 8 nucleotides
DDA3937_RS07725 and DDA3937_RS07730 overlap by 11 nucleotides
DDA3937_RS07710: DDA3937_RS07710 - diaminobutyrate--2-oxoglutarate transaminase, at 1,738,643 to 1,740,022
_RS07710
DDA3937_RS07715: DDA3937_RS07715 - TonB-dependent receptor, at 1,740,194 to 1,742,308
_RS07715
DDA3937_RS07720: DDA3937_RS07720 - IucA/IucC family siderophore biosynthesis protein, at 1,742,415 to 1,744,277
_RS07720
DDA3937_RS07725: DDA3937_RS07725 - type III PLP-dependent enzyme, at 1,744,270 to 1,745,505
_RS07725
DDA3937_RS07730: DDA3937_RS07730 - DHA2 family efflux MFS transporter permease subunit, at 1,745,495 to 1,746,943
_RS07730
Group
Condition
DDA3937
_RS07710
DDA3937
_RS07715
DDA3937
_RS07720
DDA3937
_RS07725
DDA3937
_RS07730
plant
Stem-Norland
-0.9
-1.0
-0.0
-0.1
-0.5
plant
Stem-Norland
-0.1
-1.5
-0.2
-0.1
-0.1
plant
Stem-Norland
-0.9
-0.7
-0.0
-0.2
+0.1
plant
Stem-Atlantic
-0.5
-0.5
+0.1
-0.2
-0.6
plant
Stem-Norland
-0.0
-0.8
+0.3
+0.3
-0.9
plant
Stem-Atlantic
-0.3
-1.1
+0.2
-0.3
+0.6
plant
Atlantic
+0.4
+0.1
+0.1
+0.4
-0.9
plant
Stem-Atlantic
+0.1
-0.5
+0.1
+0.4
+0.9
plant
Atlantic
+0.8
+0.4
+0.3
+0.2
-0.4
stress
7.5mM_PTB
+0.3
+0.9
+0.2
+0.0
+0.4
plant
Norland
+0.8
+0.3
+0.3
+0.5
-0.0
plant
Atlantic
+0.9
-0.0
+0.7
+0.6
-0.0
carbon source
M9+glycerol
+0.4
+1.3
-0.3
-0.0
+0.9
carbon source
M9+glycerol
+0.8
+1.4
-0.0
+0.1
+0.6
carbon source
M9+glucose
+0.5
+0.8
+0.5
+0.6
+0.8
control
PDB
+0.6
+2.3
+0.2
+0.8
-0.7
carbon source
M9+glycerol
+1.3
+1.4
+0.1
+0.6
-0.1
carbon source
M9+glycerol
+1.8
+1.3
-0.0
+0.1
+0.2
control
PDB
+0.7
+2.5
+0.4
+0.2
-0.5
carbon source
M9+glycerol
+1.0
+1.2
+0.1
+0.3
+0.8
carbon source
M9+glycerol
+1.7
+0.9
+0.0
+0.2
+0.6
carbon source
M9+glucose
+0.5
+1.1
+0.5
+0.8
+1.2
carbon source
M9+glucose
+0.4
+0.9
+0.8
+1.1
+1.2
control
PDB
+0.8
+2.4
+0.5
+1.0
-0.2
carbon source
M9+glucose+arginine
+0.2
+1.3
+0.8
+0.8
+1.4
control
PDB
+1.0
+2.5
+0.2
+0.5
+0.5
carbon source
M9+glucose+arginine
+0.9
+1.4
+0.7
+0.9
+1.1
control
PDB
+1.2
+2.5
+0.5
+0.2
+0.9
control
PDB
+0.8
+2.7
+0.6
+0.9
+0.4
carbon source
M9+glucose+arginine
+0.9
+1.4
+1.0
+1.1
+1.5
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