Fitness for 5 genes in Dickeya dadantii 3937

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 76 experiments or choose conditions or try the comparative fitness browser

500 ntDDA3937_RS07155 and DDA3937_RS07160 are separated by 20 nucleotidesDDA3937_RS07160 and DDA3937_RS07165 are separated by 133 nucleotidesDDA3937_RS07165 and DDA3937_RS07170 overlap by 4 nucleotidesDDA3937_RS07170 and DDA3937_RS07175 are separated by 159 nucleotides DDA3937_RS07155: DDA3937_RS07155 - multidrug efflux RND transporter permease subunit, at 1,610,865 to 1,613,999 _RS07155 DDA3937_RS07160: DDA3937_RS07160 - efflux RND transporter periplasmic adaptor subunit, at 1,614,020 to 1,615,282 _RS07160 DDA3937_RS07165: DDA3937_RS07165 - response regulator transcription factor, at 1,615,416 to 1,616,153 _RS07165 DDA3937_RS07170: DDA3937_RS07170 - HAMP domain-containing protein, at 1,616,150 to 1,617,277 _RS07170 DDA3937_RS07175: DDA3937_RS07175 - LysR family transcriptional regulator, at 1,617,437 to 1,618,336 _RS07175
Group Condition DDA3937_RS07155 DDA3937_RS07160 DDA3937_RS07165 DDA3937_RS07170 DDA3937_RS07175
plant Atlantic -0.2 -0.8 -0.2 -0.7 -0.6
plant Atlantic -0.0 -0.5 -0.2 +0.4 -2.1
plant Stem-Atlantic -0.1 -1.0 -0.3 -0.4 -0.4
plant Stem-Norland +0.1 -0.5 +0.1 +0.4 -2.0
plant Atlantic +0.3 +0.0 -0.1 -0.1 -2.0
plant Upstate -0.2 -0.1 -0.1 +0.1 -1.6
plant Norland -0.0 -0.3 +0.2 -0.1 -1.5
control PDB +0.1 -0.3 -0.2 +0.5 -2.0
carbon source M9+glucose+arginine -0.2 +0.3 -0.2 -0.4 -1.1
plant Stem-Atlantic -0.0 -0.2 -0.1 -0.4 -0.6
carbon source M9+starch +0.0 -0.3 -0.3 +0.1 -0.8
plant Atlantic -0.2 -0.1 +0.5 -0.0 -1.4
carbon source M9+sucrose -0.0 +0.2 -0.2 +0.1 -1.2
carbon source M9+glucose+arginine +0.1 +0.7 -0.4 -0.2 -1.4
plant Stem-Norland -0.1 -0.2 +0.1 -0.4 -0.5
control PDB +0.1 -0.4 -0.1 +0.1 -0.7
carbon source M9+glycerol +0.1 +0.2 +0.1 +0.1 -0.9
plant Norland +0.4 -0.2 -0.3 +0.4 -0.6
carbon source M9+glucose +0.0 +0.6 -0.2 -0.1 -0.6
plant Atlantic -0.1 -0.2 +0.4 +0.3 -0.7
carbon source M9+glucose+arginine -0.1 +0.3 -0.3 +0.4 -0.5
carbon source M9+polygalacturonate +0.2 +0.4 -0.1 +0.1 -0.5
control PDB +0.2 +0.7 -0.1 +0.7 -0.9
plant Stem-Atlantic +0.3 +0.4 -0.2 -0.5 +0.9
plant Stem-Atlantic -0.2 +0.8 -0.5 -0.4 +1.3
plant Upstate -0.1 +0.2 -0.0 -0.2 +1.1
plant Stem-Atlantic -0.1 +1.1 +0.5 +0.0 -0.4
control PDB -0.2 +0.1 -0.0 +0.9 +0.5
plant Stem-Norland -0.2 +0.5 +0.4 -0.2 +0.9
control PDB +0.2 -0.1 -0.3 +0.6 +1.3
remove
DDA3937_RS07155
plot
remove
DDA3937_RS07160
plot
remove
DDA3937_RS07165
remove
DDA3937_RS07170
plot
remove
DDA3937_RS07175
plot