Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS06545 and DDA3937_RS06550 are separated by 22 nucleotidesDDA3937_RS06550 and DDA3937_RS06555 are separated by 46 nucleotidesDDA3937_RS06555 and DDA3937_RS06560 are separated by 272 nucleotidesDDA3937_RS06560 and DDA3937_RS06565 are separated by 120 nucleotides DDA3937_RS06545: DDA3937_RS06545 - quinolinate synthase NadA, at 1,460,405 to 1,461,451 _RS06545 DDA3937_RS06550: DDA3937_RS06550 - nicotinamide riboside transporter PnuC, at 1,461,474 to 1,462,199 _RS06550 DDA3937_RS06555: DDA3937_RS06555 - CDF family zinc transporter ZitB, at 1,462,246 to 1,463,181 _RS06555 DDA3937_RS06560: DDA3937_RS06560 - 3-deoxy-7-phosphoheptulonate synthase AroG, at 1,463,454 to 1,464,506 _RS06560 DDA3937_RS06565: DDA3937_RS06565 - IS4 family transposase, at 1,464,627 to 1,465,949 _RS06565
Group Condition DDA3937_RS06545 DDA3937_RS06550 DDA3937_RS06555 DDA3937_RS06560 DDA3937_RS06565
carbon source M9+sucrose -3.9 -0.1 -0.2 -0.0 -0.0
carbon source M9+glucose+arginine -3.6 -0.3 +0.1 -0.3 -0.1
carbon source M9+glucose -3.7 -0.1 -0.0 +0.0 -0.1
carbon source M9+glucose -3.5 -0.2 -0.0 +0.1 -0.1
carbon source M9+sucrose -3.4 +0.0 +0.0 -0.1 -0.0
carbon source M9+glucose -3.0 -0.0 +0.1 -0.2 -0.2
carbon source M9+sucrose -3.3 +0.0 +0.1 -0.0 -0.0
carbon source M9+glucose+arginine -3.1 -0.1 -0.1 +0.0 +0.0
carbon source M9+glucose+arginine -3.0 +0.0 -0.2 +0.1 -0.0
carbon source M9+polygalacturonate -1.8 +0.0 +0.1 -0.1 -0.2
control PDB -0.5 -0.4 -0.7 +0.1 -0.5
carbon source M9+polygalacturonate -2.0 +0.1 -0.0 -0.1 +0.0
carbon source M9+glycerol -1.6 -0.1 -0.1 -0.0 -0.1
carbon source M9+polygalacturonate -2.0 +0.2 -0.0 +0.1 -0.0
plant Stem-Norland -1.2 +0.4 -0.5 -0.2 -0.0
control PDB +0.3 -0.5 -1.0 -0.0 -0.2
carbon source M9+glycerol -1.1 -0.0 -0.0 -0.3 +0.1
carbon source M9+glycerol -1.3 +0.0 +0.0 -0.2 +0.2
plant Stem-Norland -0.4 +0.1 -0.4 -0.2 +0.1
carbon source M9+glycerol -0.9 +0.1 +0.1 -0.1 +0.0
carbon source M9+glycerol -0.8 +0.2 +0.0 -0.0 -0.1
carbon source M9+glycerol -1.0 +0.1 +0.2 -0.1 +0.1
control PDB +0.8 -0.2 -0.5 -0.0 -0.5
plant Stem-Norland +0.2 +0.2 -0.7 -0.3 +0.2
control PDB +0.7 -0.1 -0.9 +0.1 +0.3
plant Stem-Norland -0.2 +0.2 +0.4 -0.2 +0.4
control PDB +0.8 -0.2 +0.1 -0.1 +0.0
plant Upstate +0.3 +0.1 +0.3 -0.2 +0.4
control PDB +0.7 -0.0 +0.0 +0.2 +0.0
plant Stem-Atlantic +0.7 +0.7 +0.4 -0.1 -0.1
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