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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS06505 and DDA3937_RS06510 are separated by 128 nucleotides
DDA3937_RS06510 and DDA3937_RS06515 are separated by 132 nucleotides
DDA3937_RS06515 and DDA3937_RS06520 are separated by 38 nucleotides
DDA3937_RS06520 and DDA3937_RS06525 are separated by 9 nucleotides
DDA3937_RS06505: DDA3937_RS06505 - colicin uptake protein TolR, at 1,453,447 to 1,453,872
_RS06505
DDA3937_RS06510: DDA3937_RS06510 - cell envelope integrity protein TolA, at 1,454,001 to 1,455,197
_RS06510
DDA3937_RS06515: DDA3937_RS06515 - Tol-Pal system protein TolB, at 1,455,330 to 1,456,616
_RS06515
DDA3937_RS06520: DDA3937_RS06520 - peptidoglycan-associated lipoprotein Pal, at 1,456,655 to 1,457,161
_RS06520
DDA3937_RS06525: DDA3937_RS06525 - cell division protein CpoB, at 1,457,171 to 1,457,995
_RS06525
Group
Condition
DDA3937
_RS06505
DDA3937
_RS06510
DDA3937
_RS06515
DDA3937
_RS06520
DDA3937
_RS06525
control
PDB
N.D.
N.D.
N.D.
N.D.
-1.1
control
PDB
N.D.
N.D.
N.D.
N.D.
-0.9
control
PDB
N.D.
N.D.
N.D.
N.D.
-0.8
plant
Stem-Atlantic
N.D.
N.D.
N.D.
N.D.
-0.5
stress
1.88mM_PTB
N.D.
N.D.
N.D.
N.D.
-0.4
plant
Norland
N.D.
N.D.
N.D.
N.D.
-0.4
control
PDB
N.D.
N.D.
N.D.
N.D.
-0.4
control
PDB
N.D.
N.D.
N.D.
N.D.
-0.3
stress
1.88mM_PTB
N.D.
N.D.
N.D.
N.D.
-0.3
control
PDB
N.D.
N.D.
N.D.
N.D.
-0.3
stress
7.5mM_PTB
N.D.
N.D.
N.D.
N.D.
-0.3
stress
7.5mM_PTB
N.D.
N.D.
N.D.
N.D.
-0.3
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
-0.3
stress
7.5mM_PTB
N.D.
N.D.
N.D.
N.D.
-0.3
stress
7.5mM_PTB
N.D.
N.D.
N.D.
N.D.
-0.3
plant
Norland
N.D.
N.D.
N.D.
N.D.
-0.2
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
-0.2
plant
Stem-Norland
N.D.
N.D.
N.D.
N.D.
-0.2
plant
Upstate
N.D.
N.D.
N.D.
N.D.
-0.2
plant
Stem-Norland
N.D.
N.D.
N.D.
N.D.
-0.2
carbon source
M9+starch
N.D.
N.D.
N.D.
N.D.
-0.2
stress
1.88mM_PTB
N.D.
N.D.
N.D.
N.D.
-0.2
control
LB
N.D.
N.D.
N.D.
N.D.
-0.2
control
LB
N.D.
N.D.
N.D.
N.D.
-0.2
carbon source
M9+starch
N.D.
N.D.
N.D.
N.D.
+0.2
plant
Norland
N.D.
N.D.
N.D.
N.D.
+0.2
carbon source
M9+starch
N.D.
N.D.
N.D.
N.D.
+0.2
carbon source
M9+glucose+arginine
N.D.
N.D.
N.D.
N.D.
+0.3
plant
Atlantic
N.D.
N.D.
N.D.
N.D.
+0.3
plant
Stem-Norland
N.D.
N.D.
N.D.
N.D.
+0.4
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