Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS06390 and DDA3937_RS06395 are separated by 434 nucleotidesDDA3937_RS06395 and DDA3937_RS06400 are separated by 276 nucleotidesDDA3937_RS06400 and DDA3937_RS06405 are separated by 29 nucleotidesDDA3937_RS06405 and DDA3937_RS06410 are separated by 31 nucleotides DDA3937_RS06390: DDA3937_RS06390 - K(+)-transporting ATPase subunit F, at 1,429,260 to 1,429,349 _RS06390 DDA3937_RS06395: DDA3937_RS06395 - YbfA family protein, at 1,429,784 to 1,429,990 _RS06395 DDA3937_RS06400: DDA3937_RS06400 - DUF1722 domain-containing protein, at 1,430,267 to 1,431,226 _RS06400 DDA3937_RS06405: DDA3937_RS06405 - deoxyribodipyrimidine photo-lyase, at 1,431,256 to 1,432,686 _RS06405 DDA3937_RS06410: DDA3937_RS06410 - type 2 GTP cyclohydrolase I, at 1,432,718 to 1,433,461 _RS06410
Group Condition DDA3937_RS06390 DDA3937_RS06395 DDA3937_RS06400 DDA3937_RS06405 DDA3937_RS06410
carbon source M9+starch -0.2 -0.4 -0.4 -0.2 -0.2
carbon source M9+glucose -0.2 -0.6 -0.1 +0.1 -0.5
plant Atlantic +0.0 -0.4 -0.1 -0.1 -0.7
plant Upstate -0.4 -0.3 -0.3 -0.2 +0.1
carbon source M9+glycerol +0.1 -0.9 -0.1 +0.1 +0.0
carbon source M9+glucose +0.1 -0.3 +0.0 -0.0 -0.5
carbon source M9+glycerol -0.2 +0.2 +0.1 +0.0 -0.8
plant Atlantic +0.4 +0.1 -0.4 -0.1 -0.5
plant Upstate -0.6 +0.4 +0.1 -0.1 -0.3
plant Atlantic -0.2 -0.5 +0.5 +0.3 -0.2
carbon source M9+glucose+arginine +0.2 -0.3 -0.1 +0.4 -0.3
plant Upstate +0.5 -0.1 -0.0 +0.2 -0.6
control PDB -0.2 +0.5 -0.4 +0.2 +0.1
plant Stem-Norland -0.4 -0.1 +0.3 +0.4 +0.1
carbon source M9+glycerol +0.5 -0.1 +0.2 -0.0 -0.2
carbon source M9+glycerol +0.2 +0.3 +0.2 -0.0 -0.3
plant Stem-Norland -0.6 -0.1 +0.4 +0.1 +0.6
plant Stem-Norland -0.6 +1.0 +0.5 +0.0 -0.5
plant Stem-Atlantic +0.3 +0.5 +0.4 -0.3 -0.4
plant Stem-Norland -0.4 +0.3 +0.4 +0.0 +0.1
control PDB +0.3 -0.2 -0.1 +0.4 +0.1
control PDB -0.2 +0.4 +0.4 +0.2 -0.3
plant Stem-Atlantic -0.4 +0.1 +0.2 +0.4 +0.2
control PDB +0.5 -0.1 -0.3 +0.1 +0.4
plant Norland +0.0 -0.3 +0.1 +0.3 +0.5
plant Atlantic +0.8 +0.4 +0.0 -0.0 -0.3
plant Norland -0.2 +1.0 -0.2 +0.7 -0.3
plant Stem-Norland +0.8 +0.6 +0.2 -0.2 -0.2
plant Stem-Atlantic -0.0 +0.4 +0.3 +0.3 +0.3
plant Stem-Atlantic +0.5 +0.3 +0.2 +0.3 +0.2
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