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Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS06000 and DDA3937_RS06005 are separated by 19 nucleotides
DDA3937_RS06005 and DDA3937_RS06010 are separated by 120 nucleotides
DDA3937_RS06010 and DDA3937_RS06015 are separated by 437 nucleotides
DDA3937_RS06015 and DDA3937_RS06020 are separated by 278 nucleotides
DDA3937_RS06000: DDA3937_RS06000 - galactose/methyl galactoside ABC transporter permease MglC, at 1,351,566 to 1,352,576
_RS06000
DDA3937_RS06005: DDA3937_RS06005 - galactose/methyl galactoside ABC transporter ATP-binding protein MglA, at 1,352,596 to 1,354,116
_RS06005
DDA3937_RS06010: DDA3937_RS06010 - galactose/glucose ABC transporter substrate-binding protein MglB, at 1,354,237 to 1,355,232
_RS06010
DDA3937_RS06015: DDA3937_RS06015 - HTH-type transcriptional regulator GalS, at 1,355,670 to 1,356,668
_RS06015
DDA3937_RS06020: DDA3937_RS06020 - phosphoribosylglycinamide formyltransferase, at 1,356,947 to 1,357,585
_RS06020
Group
Condition
DDA3937
_RS06000
DDA3937
_RS06005
DDA3937
_RS06010
DDA3937
_RS06015
DDA3937
_RS06020
carbon source
M9+polygalacturonate
+0.2
+0.1
+0.4
-1.8
-0.6
carbon source
M9+starch
-0.0
+0.1
-0.1
-0.2
-1.3
carbon source
M9+glucose
-0.2
+0.1
-0.2
-0.0
-1.0
carbon source
M9+polygalacturonate
+0.2
+0.1
+0.3
-1.4
-0.5
carbon source
M9+sucrose
+0.0
-0.1
+0.0
-0.2
-1.0
carbon source
M9+polygalacturonate
+0.3
+0.2
+0.3
-1.4
-0.5
carbon source
M9+sucrose
+0.1
-0.1
-0.1
-0.1
-0.9
carbon source
M9+glucose
-0.1
-0.1
-0.3
+0.2
-0.9
carbon source
M9+glucose
+0.0
-0.3
-0.2
+0.2
-0.8
carbon source
M9+glucose+arginine
-0.1
-0.3
-0.1
+0.2
-0.7
plant
Stem-Atlantic
+0.1
-0.0
-0.3
+0.1
-0.8
plant
Stem-Norland
+0.1
+0.2
-0.4
-0.6
-0.2
carbon source
M9+glucose+arginine
-0.1
-0.2
-0.2
+0.2
-0.5
carbon source
M9+sucrose
-0.0
-0.1
-0.1
+0.4
-0.9
plant
Stem-Atlantic
+0.3
-0.1
-0.2
+0.3
-1.0
plant
Atlantic
+0.0
-0.3
-0.0
+0.4
-0.7
plant
Norland
-0.1
-0.2
+0.2
+0.4
-0.8
carbon source
M9+glycerol
+0.2
+0.3
+0.2
-0.0
-1.1
carbon source
M9+glucose+arginine
-0.1
+0.1
+0.0
+0.4
-0.8
plant
Upstate
+0.0
+0.1
-0.2
+0.5
-0.4
plant
Norland
+0.0
+0.4
+0.1
+0.2
-0.7
plant
Norland
-0.1
+0.1
+0.5
+0.3
-0.5
plant
Stem-Norland
+0.2
+0.1
-0.2
-0.3
+0.6
plant
Upstate
+0.3
-0.1
-0.1
+0.8
-0.5
plant
Atlantic
-0.2
+0.1
+0.1
+0.9
-0.3
plant
Upstate
-0.1
-0.0
+0.2
+0.9
-0.2
plant
Norland
+0.0
+0.0
+0.1
+1.0
-0.3
plant
Stem-Norland
+0.1
-0.0
+0.1
-0.1
+1.0
plant
Stem-Atlantic
-0.1
-0.1
-0.2
+0.9
+0.5
plant
Norland
-0.0
+0.5
+0.3
+0.9
-0.3
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