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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS05990 and DDA3937_RS05995 overlap by 1 nucleotides
DDA3937_RS05995 and DDA3937_RS06000 are separated by 247 nucleotides
DDA3937_RS06000 and DDA3937_RS06005 are separated by 19 nucleotides
DDA3937_RS06005 and DDA3937_RS06010 are separated by 120 nucleotides
DDA3937_RS05990: DDA3937_RS05990 - amino acid ABC transporter permease, at 1,349,652 to 1,350,497
_RS05990
DDA3937_RS05995: DDA3937_RS05995 - transporter substrate-binding domain-containing protein, at 1,350,497 to 1,351,318
_RS05995
DDA3937_RS06000: DDA3937_RS06000 - galactose/methyl galactoside ABC transporter permease MglC, at 1,351,566 to 1,352,576
_RS06000
DDA3937_RS06005: DDA3937_RS06005 - galactose/methyl galactoside ABC transporter ATP-binding protein MglA, at 1,352,596 to 1,354,116
_RS06005
DDA3937_RS06010: DDA3937_RS06010 - galactose/glucose ABC transporter substrate-binding protein MglB, at 1,354,237 to 1,355,232
_RS06010
Group
Condition
DDA3937
_RS05990
DDA3937
_RS05995
DDA3937
_RS06000
DDA3937
_RS06005
DDA3937
_RS06010
carbon source
M9+glycerol
-0.0
-0.5
+0.1
-0.3
-0.4
plant
Stem-Atlantic
+0.1
-0.7
+0.1
-0.2
-0.2
control
PDB
+0.1
-0.3
+0.1
-0.1
-0.3
carbon source
M9+glucose+arginine
+0.0
+0.1
-0.1
-0.2
-0.2
control
PDB
+0.1
-0.2
-0.3
-0.2
+0.1
carbon source
M9+glucose
-0.1
+0.1
+0.0
-0.3
-0.2
control
PDB
-0.0
-0.4
-0.1
-0.0
+0.1
plant
Stem-Atlantic
-0.2
+0.1
+0.1
-0.0
-0.3
plant
Upstate
+0.2
-0.6
-0.0
+0.1
+0.1
control
PDB
-0.3
-0.4
+0.1
+0.2
+0.2
carbon source
M9+glycerol
-0.1
-0.2
+0.2
-0.0
+0.1
plant
Stem-Norland
-0.1
+0.1
+0.1
+0.2
-0.4
plant
Norland
-0.1
-0.4
+0.1
+0.1
+0.3
carbon source
M9+glucose
+0.1
+0.2
-0.1
-0.1
-0.3
plant
Stem-Atlantic
-0.1
+0.2
+0.3
-0.1
-0.2
control
LB
+0.1
-0.2
+0.1
+0.2
+0.1
plant
Atlantic
+0.1
+0.4
+0.0
-0.2
-0.1
plant
Atlantic
+0.4
+0.0
-0.0
-0.0
-0.1
plant
Norland
+0.1
-0.6
-0.0
+0.5
+0.3
plant
Upstate
-0.1
-0.2
-0.0
+0.4
+0.2
carbon source
M9+polygalacturonate
+0.1
-0.4
+0.3
+0.2
+0.3
plant
Upstate
+0.3
+0.1
+0.3
-0.1
-0.1
plant
Norland
-0.1
+0.7
-0.1
-0.2
+0.2
plant
Upstate
+0.3
+0.2
+0.2
-0.1
-0.0
plant
Norland
+0.1
+0.1
-0.1
+0.1
+0.5
plant
Stem-Norland
-0.1
+0.1
+0.5
+0.1
+0.1
carbon source
M9+polygalacturonate
+0.1
-0.1
+0.2
+0.1
+0.3
carbon source
M9+glycerol
-0.0
+0.1
+0.2
+0.3
+0.2
carbon source
M9+polygalacturonate
-0.0
+0.1
+0.2
+0.1
+0.4
plant
Norland
+0.0
+0.3
+0.0
+0.4
+0.1
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