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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS05625 and DDA3937_RS05630 are separated by 326 nucleotides
DDA3937_RS05630 and DDA3937_RS05635 are separated by 351 nucleotides
DDA3937_RS05635 and DDA3937_RS05640 are separated by 401 nucleotides
DDA3937_RS05640 and DDA3937_RS05645 are separated by 127 nucleotides
DDA3937_RS05625: DDA3937_RS05625 - hypothetical protein, at 1,256,325 to 1,256,903
_RS05625
DDA3937_RS05630: DDA3937_RS05630 - transcriptional regulator BolA, at 1,257,230 to 1,257,544
_RS05630
DDA3937_RS05635: DDA3937_RS05635 - trigger factor, at 1,257,896 to 1,259,200
_RS05635
DDA3937_RS05640: DDA3937_RS05640 - ATP-dependent Clp endopeptidase proteolytic subunit ClpP, at 1,259,602 to 1,260,225
_RS05640
DDA3937_RS05645: DDA3937_RS05645 - ATP-dependent protease ATP-binding subunit ClpX, at 1,260,353 to 1,261,627
_RS05645
Group
Condition
DDA3937
_RS05625
DDA3937
_RS05630
DDA3937
_RS05635
DDA3937
_RS05640
DDA3937
_RS05645
plant
Stem-Norland
-0.0
-0.0
-2.0
-3.0
-2.4
plant
Stem-Atlantic
-0.5
-0.4
-1.1
-3.2
-1.7
stress
3.75mM_PTB
-0.2
+0.1
-1.1
-2.0
-3.1
plant
Stem-Norland
-0.4
-0.1
-1.2
-2.8
-1.8
stress
7.5mM_PTB
-0.5
-0.3
-0.6
-2.0
-2.6
stress
3.75mM_PTB
-0.0
+0.2
-0.4
-2.4
-3.1
stress
3.75mM_PTB
-0.1
+0.2
-0.4
-2.4
-2.9
stress
7.5mM_PTB
-0.3
-0.1
-0.6
-2.0
-2.6
stress
3.75mM_PTB
-0.1
+0.2
-0.4
-2.1
-3.1
carbon source
M9+sucrose
+0.0
-0.3
+0.2
-2.9
-2.5
stress
7.5mM_PTB
-0.5
-0.0
-0.6
-1.7
-2.6
plant
Norland
-0.2
-0.1
-1.6
-1.4
-2.0
plant
Upstate
-0.2
-0.0
-1.2
-2.0
-2.0
plant
Stem-Norland
+0.0
-0.5
-1.0
-2.4
-1.4
stress
1.88mM_PTB
-0.1
+0.1
-0.4
-2.2
-2.7
stress
1.88mM_PTB
-0.1
+0.0
-0.4
-2.3
-2.6
stress
1.88mM_PTB
+0.1
-0.0
-0.3
-2.6
-2.5
carbon source
M9+sucrose
+0.1
-0.3
+0.1
-2.5
-2.6
plant
Stem-Atlantic
-0.1
-0.6
-0.5
-2.3
-1.4
plant
Stem-Atlantic
-0.3
-0.2
-0.3
-2.6
-1.4
plant
Stem-Norland
+0.1
+0.1
-0.9
-2.5
-1.6
stress
7.5mM_PTB
-0.3
-0.1
+0.0
-2.2
-2.1
stress
1.88mM_PTB
-0.1
+0.4
-0.1
-2.1
-2.6
carbon source
M9+sucrose
+0.1
-0.2
+0.3
-2.2
-2.2
plant
Upstate
+0.2
-0.0
-1.3
-1.2
-1.9
plant
Upstate
-0.2
+0.5
-1.3
-1.4
-1.5
carbon source
M9+glucose
+0.1
-0.3
+1.0
-2.2
-1.9
carbon source
M9+glucose
+0.2
+0.0
+0.9
-2.1
-1.6
carbon source
M9+glucose
+0.2
-0.1
+1.3
-2.2
-1.7
carbon source
M9+glucose+arginine
-0.2
-0.5
+1.3
-1.9
-0.6
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