Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS05600 and DDA3937_RS05605 overlap by 1 nucleotidesDDA3937_RS05605 and DDA3937_RS05610 overlap by 11 nucleotidesDDA3937_RS05610 and DDA3937_RS05615 are separated by 20 nucleotidesDDA3937_RS05615 and DDA3937_RS05620 are separated by 462 nucleotides DDA3937_RS05600: DDA3937_RS05600 - cytochrome o ubiquinol oxidase subunit IV, at 1,250,440 to 1,250,772 _RS05600 DDA3937_RS05605: DDA3937_RS05605 - cytochrome o ubiquinol oxidase subunit III, at 1,250,772 to 1,251,386 _RS05605 DDA3937_RS05610: DDA3937_RS05610 - cytochrome o ubiquinol oxidase subunit I, at 1,251,376 to 1,253,367 _RS05610 DDA3937_RS05615: DDA3937_RS05615 - cytochrome o ubiquinol oxidase subunit II, at 1,253,388 to 1,254,338 _RS05615 DDA3937_RS05620: DDA3937_RS05620 - muropeptide MFS transporter AmpG, at 1,254,801 to 1,256,270 _RS05620
Group Condition DDA3937_RS05600 DDA3937_RS05605 DDA3937_RS05610 DDA3937_RS05615 DDA3937_RS05620
plant Stem-Norland N.D. N.D. -0.1 -3.1 -0.3
plant Stem-Atlantic N.D. N.D. +0.4 -3.3 -0.3
plant Stem-Norland N.D. N.D. -0.1 -2.4 -0.3
control PDB N.D. N.D. +0.1 -1.5 -0.7
control PDB N.D. N.D. -0.1 -1.4 -0.5
carbon source M9+sucrose N.D. N.D. -0.2 -2.1 +0.2
plant Atlantic N.D. N.D. +0.1 -1.7 -0.4
carbon source M9+glucose+arginine N.D. N.D. -0.2 -1.9 +0.2
stress 3.75mM_PTB N.D. N.D. -0.6 -1.0 -0.2
plant Norland N.D. N.D. -0.9 -0.8 -0.0
plant Stem-Norland N.D. N.D. -0.2 -1.4 +0.1
control LB N.D. N.D. -0.4 -1.1 +0.1
plant Stem-Norland N.D. N.D. -0.1 -1.5 +0.1
plant Stem-Atlantic N.D. N.D. -0.5 -0.5 -0.3
plant Stem-Norland N.D. N.D. -0.7 -0.9 +0.3
carbon source M9+glycerol N.D. N.D. -0.7 -0.1 -0.6
carbon source M9+glucose N.D. N.D. -0.2 -1.2 +0.2
carbon source M9+sucrose N.D. N.D. +0.1 -1.2 +0.1
plant Upstate N.D. N.D. +0.2 -0.9 -0.2
control PDB N.D. N.D. -0.7 +0.2 -0.4
carbon source M9+glycerol N.D. N.D. -0.8 +0.5 -0.5
control PDB N.D. N.D. +0.5 -0.1 -0.7
carbon source M9+glucose+arginine N.D. N.D. +0.5 -1.2 +0.3
carbon source M9+glucose+arginine N.D. N.D. +0.2 -0.9 +0.4
plant Atlantic N.D. N.D. +1.0 -1.2 +0.1
carbon source M9+glycerol N.D. N.D. -0.8 +0.9 -0.1
control PDB N.D. N.D. +0.3 +1.3 -0.6
plant Atlantic N.D. N.D. +0.2 +1.5 +0.0
plant Norland N.D. N.D. +0.9 +1.0 -0.1
carbon source M9+glycerol N.D. N.D. +0.1 +3.7 -0.2
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