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Protein
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Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS05500 and DDA3937_RS05505 are separated by 64 nucleotides
DDA3937_RS05505 and DDA3937_RS05510 are separated by 120 nucleotides
DDA3937_RS05510 and DDA3937_RS05515 are separated by 22 nucleotides
DDA3937_RS05515 and DDA3937_RS05520 are separated by 60 nucleotides
DDA3937_RS05500: DDA3937_RS05500 - transcriptional regulator NrdR, at 1,231,201 to 1,231,650
_RS05500
DDA3937_RS05505: DDA3937_RS05505 - bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD, at 1,231,715 to 1,232,827
_RS05505
DDA3937_RS05510: DDA3937_RS05510 - 6,7-dimethyl-8-ribityllumazine synthase, at 1,232,948 to 1,233,421
_RS05510
DDA3937_RS05515: DDA3937_RS05515 - transcription antitermination factor NusB, at 1,233,444 to 1,233,863
_RS05515
DDA3937_RS05520: DDA3937_RS05520 - thiamine-phosphate kinase, at 1,233,924 to 1,234,898
_RS05520
Group
Condition
DDA3937
_RS05500
DDA3937
_RS05505
DDA3937
_RS05510
DDA3937
_RS05515
DDA3937
_RS05520
carbon source
M9+glucose+arginine
-1.7
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
-1.7
N.D.
N.D.
N.D.
N.D.
plant
Norland
-1.6
N.D.
N.D.
N.D.
N.D.
plant
Norland
-1.5
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glucose+arginine
-1.5
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
-1.5
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
-1.5
N.D.
N.D.
N.D.
N.D.
carbon source
M9+polygalacturonate
-1.4
N.D.
N.D.
N.D.
N.D.
plant
Norland
-1.4
N.D.
N.D.
N.D.
N.D.
plant
Norland
-1.4
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glucose+arginine
-1.3
N.D.
N.D.
N.D.
N.D.
carbon source
M9+starch
-1.3
N.D.
N.D.
N.D.
N.D.
carbon source
M9+polygalacturonate
-1.3
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
-1.2
N.D.
N.D.
N.D.
N.D.
carbon source
M9+polygalacturonate
-1.1
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glucose
-1.1
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glucose
-1.1
N.D.
N.D.
N.D.
N.D.
plant
Atlantic
-1.0
N.D.
N.D.
N.D.
N.D.
plant
Atlantic
-1.0
N.D.
N.D.
N.D.
N.D.
plant
Upstate
-1.0
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glucose
-1.0
N.D.
N.D.
N.D.
N.D.
plant
Atlantic
-0.9
N.D.
N.D.
N.D.
N.D.
plant
Upstate
-0.9
N.D.
N.D.
N.D.
N.D.
carbon source
M9+sucrose
-0.9
N.D.
N.D.
N.D.
N.D.
plant
Atlantic
-0.8
N.D.
N.D.
N.D.
N.D.
carbon source
M9+sucrose
-0.8
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
-0.7
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
-0.7
N.D.
N.D.
N.D.
N.D.
plant
Atlantic
-0.7
N.D.
N.D.
N.D.
N.D.
plant
Norland
-0.7
N.D.
N.D.
N.D.
N.D.
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