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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS05190 and DDA3937_RS05195 are separated by 12 nucleotides
DDA3937_RS05195 and DDA3937_RS05200 are separated by 186 nucleotides
DDA3937_RS05200 and DDA3937_RS05205 overlap by 11 nucleotides
DDA3937_RS05205 and DDA3937_RS05210 are separated by 45 nucleotides
DDA3937_RS05190: DDA3937_RS05190 - DNA polymerase III subunit alpha, at 1,157,231 to 1,160,713
_RS05190
DDA3937_RS05195: DDA3937_RS05195 - acetyl-CoA carboxylase carboxyl transferase subunit alpha, at 1,160,726 to 1,161,685
_RS05195
DDA3937_RS05200: DDA3937_RS05200 - VOC family protein, at 1,161,872 to 1,162,261
_RS05200
DDA3937_RS05205: DDA3937_RS05205 - tRNA lysidine(34) synthetase TilS, at 1,162,251 to 1,163,579
_RS05205
DDA3937_RS05210: DDA3937_RS05210 - Rho-binding antiterminator, at 1,163,625 to 1,163,885
_RS05210
Group
Condition
DDA3937
_RS05190
DDA3937
_RS05195
DDA3937
_RS05200
DDA3937
_RS05205
DDA3937
_RS05210
plant
Stem-Norland
N.D.
N.D.
-1.7
N.D.
+0.0
plant
Atlantic
N.D.
N.D.
-1.1
N.D.
-0.4
plant
Stem-Atlantic
N.D.
N.D.
-2.2
N.D.
+1.0
plant
Atlantic
N.D.
N.D.
-0.7
N.D.
-0.4
plant
Stem-Norland
N.D.
N.D.
-1.2
N.D.
+0.2
plant
Norland
N.D.
N.D.
-0.6
N.D.
-0.5
plant
Atlantic
N.D.
N.D.
-0.6
N.D.
-0.4
plant
Norland
N.D.
N.D.
-0.7
N.D.
-0.3
plant
Upstate
N.D.
N.D.
-0.2
N.D.
-0.7
plant
Upstate
N.D.
N.D.
-0.5
N.D.
-0.4
plant
Stem-Atlantic
N.D.
N.D.
-0.8
N.D.
-0.1
plant
Stem-Atlantic
N.D.
N.D.
-1.3
N.D.
+0.5
plant
Stem-Norland
N.D.
N.D.
-0.6
N.D.
-0.2
plant
Atlantic
N.D.
N.D.
-0.8
N.D.
+0.0
plant
Norland
N.D.
N.D.
+0.1
N.D.
-0.7
plant
Stem-Norland
N.D.
N.D.
-1.2
N.D.
+0.7
plant
Stem-Atlantic
N.D.
N.D.
-1.2
N.D.
+0.8
plant
Stem-Atlantic
N.D.
N.D.
-0.6
N.D.
+0.6
control
PDB
N.D.
N.D.
+0.5
N.D.
-0.4
carbon source
M9+sucrose
N.D.
N.D.
-0.4
N.D.
+0.4
control
PDB
N.D.
N.D.
+0.7
N.D.
-0.7
plant
Norland
N.D.
N.D.
-0.4
N.D.
+0.5
control
PDB
N.D.
N.D.
+0.6
N.D.
-0.3
plant
Upstate
N.D.
N.D.
-0.4
N.D.
+0.8
plant
Norland
N.D.
N.D.
+0.6
N.D.
+0.4
control
LB
N.D.
N.D.
+0.1
N.D.
+1.0
control
LB
N.D.
N.D.
-0.0
N.D.
+1.2
control
PDB
N.D.
N.D.
+0.6
N.D.
+0.8
carbon source
M9+glycerol
N.D.
N.D.
+0.5
N.D.
+0.9
control
LB
N.D.
N.D.
+0.2
N.D.
+1.4
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