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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS05165 and DDA3937_RS05170 are separated by 148 nucleotides
DDA3937_RS05170 and DDA3937_RS05175 are separated by 3 nucleotides
DDA3937_RS05175 and DDA3937_RS05180 are separated by 3 nucleotides
DDA3937_RS05180 and DDA3937_RS05185 overlap by 4 nucleotides
DDA3937_RS05165: DDA3937_RS05165 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase, at 1,152,992 to 1,154,014
_RS05165
DDA3937_RS05170: DDA3937_RS05170 - 3-hydroxyacyl-ACP dehydratase FabZ, at 1,154,163 to 1,154,618
_RS05170
DDA3937_RS05175: DDA3937_RS05175 - acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase, at 1,154,622 to 1,155,410
_RS05175
DDA3937_RS05180: DDA3937_RS05180 - lipid-A-disaccharide synthase, at 1,155,414 to 1,156,562
_RS05180
DDA3937_RS05185: DDA3937_RS05185 - ribonuclease HII, at 1,156,559 to 1,157,155
_RS05185
Group
Condition
DDA3937
_RS05165
DDA3937
_RS05170
DDA3937
_RS05175
DDA3937
_RS05180
DDA3937
_RS05185
carbon source
M9+starch
N.D.
N.D.
N.D.
N.D.
-0.3
plant
Stem-Norland
N.D.
N.D.
N.D.
N.D.
-0.3
stress
3.75mM_PTB
N.D.
N.D.
N.D.
N.D.
-0.2
carbon source
M9+glucose
N.D.
N.D.
N.D.
N.D.
+0.2
plant
Stem-Norland
N.D.
N.D.
N.D.
N.D.
+0.2
carbon source
M9+sucrose
N.D.
N.D.
N.D.
N.D.
+0.2
plant
Norland
N.D.
N.D.
N.D.
N.D.
+0.3
plant
Atlantic
N.D.
N.D.
N.D.
N.D.
+0.3
plant
Upstate
N.D.
N.D.
N.D.
N.D.
+0.3
carbon source
M9+glucose+arginine
N.D.
N.D.
N.D.
N.D.
+0.4
plant
Norland
N.D.
N.D.
N.D.
N.D.
+0.4
plant
Norland
N.D.
N.D.
N.D.
N.D.
+0.4
plant
Upstate
N.D.
N.D.
N.D.
N.D.
+0.4
control
LB
N.D.
N.D.
N.D.
N.D.
+0.4
plant
Stem-Atlantic
N.D.
N.D.
N.D.
N.D.
+0.4
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
+0.4
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
+0.5
plant
Atlantic
N.D.
N.D.
N.D.
N.D.
+0.5
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
+0.5
plant
Atlantic
N.D.
N.D.
N.D.
N.D.
+0.5
plant
Norland
N.D.
N.D.
N.D.
N.D.
+0.6
carbon source
M9+glucose+arginine
N.D.
N.D.
N.D.
N.D.
+0.6
plant
Upstate
N.D.
N.D.
N.D.
N.D.
+0.6
plant
Upstate
N.D.
N.D.
N.D.
N.D.
+0.7
plant
Stem-Atlantic
N.D.
N.D.
N.D.
N.D.
+0.7
carbon source
M9+glucose+arginine
N.D.
N.D.
N.D.
N.D.
+0.8
plant
Atlantic
N.D.
N.D.
N.D.
N.D.
+0.8
control
PDB
N.D.
N.D.
N.D.
N.D.
+0.8
plant
Upstate
N.D.
N.D.
N.D.
N.D.
+0.9
plant
Norland
N.D.
N.D.
N.D.
N.D.
+1.1
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