Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS04860 and DDA3937_RS04865 are separated by 163 nucleotidesDDA3937_RS04865 and DDA3937_RS04870 are separated by 664 nucleotidesDDA3937_RS04870 and DDA3937_RS04875 are separated by 369 nucleotidesDDA3937_RS04875 and DDA3937_RS04880 are separated by 425 nucleotides DDA3937_RS04860: DDA3937_RS04860 - tyrosine-type recombinase/integrase, at 1,087,070 to 1,088,329 _RS04860 DDA3937_RS04865: DDA3937_RS04865 - tRNA-Phe, at 1,088,493 to 1,088,568 _RS04865 DDA3937_RS04870: DDA3937_RS04870 - ornithine decarboxylase, at 1,089,233 to 1,091,386 _RS04870 DDA3937_RS04875: DDA3937_RS04875 - IS110 family transposase, at 1,091,756 to 1,092,745 _RS04875 DDA3937_RS04880: DDA3937_RS04880 - IS110-like element ISEch4 family transposase, at 1,093,171 to 1,094,175 _RS04880
Group Condition DDA3937_RS04860 DDA3937_RS04865 DDA3937_RS04870 DDA3937_RS04875 DDA3937_RS04880
control PDB +0.0 N.D. -0.4 N.D. N.D.
carbon source M9+glycerol -0.2 N.D. -0.1 N.D. N.D.
plant Atlantic -0.2 N.D. -0.1 N.D. N.D.
carbon source M9+polygalacturonate +0.0 N.D. -0.3 N.D. N.D.
carbon source M9+polygalacturonate +0.1 N.D. -0.3 N.D. N.D.
carbon source M9+glycerol +0.2 N.D. -0.3 N.D. N.D.
plant Upstate -0.2 N.D. +0.1 N.D. N.D.
plant Atlantic +0.2 N.D. -0.2 N.D. N.D.
plant Stem-Norland -0.2 N.D. +0.2 N.D. N.D.
carbon source M9+sucrose +0.2 N.D. -0.2 N.D. N.D.
stress 7.5mM_PTB +0.1 N.D. -0.1 N.D. N.D.
plant Stem-Atlantic +0.2 N.D. -0.2 N.D. N.D.
control PDB +0.2 N.D. -0.2 N.D. N.D.
control PDB +0.3 N.D. -0.1 N.D. N.D.
plant Stem-Atlantic +0.4 N.D. -0.1 N.D. N.D.
plant Norland +0.1 N.D. +0.2 N.D. N.D.
carbon source M9+glucose+arginine +0.3 N.D. +0.0 N.D. N.D.
control LB +0.2 N.D. +0.0 N.D. N.D.
plant Stem-Norland -0.1 N.D. +0.4 N.D. N.D.
plant Norland +0.1 N.D. +0.2 N.D. N.D.
plant Stem-Norland -0.0 N.D. +0.3 N.D. N.D.
carbon source M9+glycerol +0.4 N.D. -0.0 N.D. N.D.
plant Upstate +0.5 N.D. -0.1 N.D. N.D.
control PDB +0.4 N.D. +0.0 N.D. N.D.
plant Stem-Atlantic +0.3 N.D. +0.1 N.D. N.D.
carbon source M9+glucose +0.3 N.D. +0.2 N.D. N.D.
plant Stem-Atlantic +0.4 N.D. +0.1 N.D. N.D.
plant Stem-Norland +0.3 N.D. +0.3 N.D. N.D.
plant Stem-Norland +0.4 N.D. +0.2 N.D. N.D.
plant Upstate +0.2 N.D. +0.3 N.D. N.D.
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DDA3937_RS04880
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