Fitness for 5 genes in Dickeya dadantii 3937

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 76 experiments or choose conditions or try the comparative fitness browser

500 ntDDA3937_RS04020 and DDA3937_RS04025 are separated by 2 nucleotidesDDA3937_RS04025 and DDA3937_RS04030 overlap by 4 nucleotidesDDA3937_RS04030 and DDA3937_RS04035 are separated by 2 nucleotidesDDA3937_RS04035 and DDA3937_RS04040 are separated by 45 nucleotides DDA3937_RS04020: DDA3937_RS04020 - P-type conjugative transfer protein TrbL, at 897,335 to 898,498 _RS04020 DDA3937_RS04025: DDA3937_RS04025 - conjugal transfer protein TrbF, at 898,501 to 899,205 _RS04025 DDA3937_RS04030: DDA3937_RS04030 - P-type conjugative transfer protein TrbG, at 899,202 to 900,098 _RS04030 DDA3937_RS04035: DDA3937_RS04035 - TrbI/VirB10 family protein, at 900,101 to 901,339 _RS04035 DDA3937_RS04040: DDA3937_RS04040 - type II toxin-antitoxin system RelE/ParE family toxin, at 901,385 to 901,696 _RS04040
Group Condition DDA3937_RS04020 DDA3937_RS04025 DDA3937_RS04030 DDA3937_RS04035 DDA3937_RS04040
plant Stem-Norland +0.0 -0.5 +0.0 -0.4 -0.5
plant Stem-Norland +0.1 -0.6 -0.0 -0.3 -0.4
plant Stem-Atlantic -0.2 -0.3 -0.2 -0.1 -0.1
carbon source M9+polygalacturonate -0.1 +0.1 -0.2 -0.3 -0.3
plant Atlantic -0.2 -0.2 +0.2 +0.2 -0.8
plant Upstate +0.1 -0.0 +0.0 -0.3 -0.6
plant Upstate -0.0 +0.2 -0.2 -0.3 -0.3
plant Stem-Atlantic +0.2 -0.2 +0.1 -0.7 +0.1
control PDB +0.4 -0.1 +0.1 +0.3 -1.1
plant Norland +0.3 +0.1 -0.0 -0.1 -0.6
plant Upstate -0.2 -0.2 +0.2 +0.3 -0.4
plant Norland -0.1 +0.3 +0.0 -0.1 -0.3
control PDB -0.1 -0.1 +0.2 +0.4 -0.6
plant Stem-Atlantic -0.1 -0.2 -0.1 +0.3 -0.0
plant Norland -0.2 +0.4 +0.0 +0.0 -0.4
plant Atlantic +0.2 -0.3 +0.1 -0.3 +0.2
carbon source M9+glucose -0.0 +0.2 +0.2 -0.2 -0.3
plant Stem-Atlantic +0.2 -0.0 -0.5 +0.4 +0.1
plant Norland +0.2 +0.1 -0.0 +0.4 -0.5
carbon source M9+glycerol +0.4 -0.1 +0.4 -0.0 -0.5
plant Norland +0.6 -0.1 +0.1 -0.2 +0.0
plant Upstate +0.0 +0.2 +0.3 -0.2 +0.1
carbon source M9+glycerol -0.1 -0.2 +0.5 +0.1 +0.1
plant Norland +0.5 +0.4 +0.1 -0.1 -0.4
plant Stem-Norland +0.3 +0.5 +0.0 -0.0 -0.4
control PDB -0.1 +0.4 +0.4 +0.3 -0.5
plant Atlantic +0.3 +0.1 +0.0 +0.3 +0.1
control PDB -0.2 +0.4 +0.6 +0.2 -0.2
carbon source M9+glycerol +0.3 +0.0 +0.3 +0.2 -0.0
carbon source M9+glucose+arginine +0.1 +0.1 +0.2 +0.2 +0.3
remove
DDA3937_RS04020
plot		 remove
DDA3937_RS04025
plot		 remove
DDA3937_RS04030		 remove
DDA3937_RS04035
plot		 remove
DDA3937_RS04040
plot