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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS03705 and DDA3937_RS03710 are separated by 56 nucleotides
DDA3937_RS03710 and DDA3937_RS03715 are separated by 16 nucleotides
DDA3937_RS03715 and DDA3937_RS03720 are separated by 17 nucleotides
DDA3937_RS03720 and DDA3937_RS03725 are separated by 54 nucleotides
DDA3937_RS03705: DDA3937_RS03705 - substrate-binding domain-containing protein, at 819,439 to 820,377
_RS03705
DDA3937_RS03710: DDA3937_RS03710 - sugar ABC transporter ATP-binding protein, at 820,434 to 821,981
_RS03710
DDA3937_RS03715: DDA3937_RS03715 - ABC transporter permease, at 821,998 to 823,032
_RS03715
DDA3937_RS03720: DDA3937_RS03720 - Gfo/Idh/MocA family oxidoreductase, at 823,050 to 824,183
_RS03720
DDA3937_RS03725: DDA3937_RS03725 - 5-dehydro-2-deoxygluconokinase, at 824,238 to 826,223
_RS03725
Group
Condition
DDA3937
_RS03705
DDA3937
_RS03710
DDA3937
_RS03715
DDA3937
_RS03720
DDA3937
_RS03725
plant
Upstate
-0.1
-0.4
-0.4
-0.3
-0.1
carbon source
M9+glycerol
-0.7
-0.1
-0.6
-0.0
+0.1
control
PDB
-0.5
-0.3
-0.3
+0.0
-0.2
plant
Stem-Norland
-0.3
-0.2
-0.8
+0.0
+0.1
carbon source
M9+glycerol
-0.5
-0.1
-0.4
-0.1
+0.1
plant
Norland
-0.4
+0.1
-0.3
-0.0
-0.3
plant
Norland
-0.5
-0.3
+0.2
-0.1
-0.2
plant
Norland
-0.6
-0.1
+0.1
-0.2
-0.1
plant
Stem-Norland
-0.8
+0.1
+0.3
-0.4
+0.1
plant
Norland
-0.4
-0.2
-0.1
+0.2
-0.2
carbon source
M9+glycerol
-0.4
-0.1
-0.2
-0.2
+0.2
control
PDB
-0.3
-0.2
-0.3
+0.2
-0.2
plant
Upstate
-0.8
-0.3
+0.0
+0.2
+0.3
plant
Atlantic
-0.5
-0.1
-0.3
+0.2
+0.1
plant
Stem-Atlantic
+0.2
-0.1
-0.5
-0.1
-0.2
plant
Stem-Atlantic
-0.6
-0.0
+0.1
+0.3
-0.2
plant
Stem-Atlantic
-0.3
-0.1
-0.3
+0.2
+0.2
carbon source
M9+polygalacturonate
+0.2
+0.1
-0.4
+0.0
-0.2
carbon source
M9+starch
+0.3
-0.0
-0.3
+0.2
-0.2
carbon source
M9+glycerol
-0.3
+0.2
+0.4
-0.2
-0.2
carbon source
M9+sucrose
+0.3
+0.2
-0.4
-0.0
-0.2
plant
Stem-Atlantic
-0.2
-0.1
-0.2
+0.5
+0.0
plant
Norland
-0.2
+0.5
-0.0
+0.2
-0.5
carbon source
M9+polygalacturonate
+0.2
+0.1
-0.3
+0.3
-0.2
plant
Upstate
-0.2
+0.2
-0.3
+0.1
+0.2
control
PDB
-0.3
+0.1
+0.2
+0.2
+0.2
control
PDB
+0.5
+0.1
+0.4
-0.1
-0.3
plant
Stem-Norland
-0.3
+0.3
+0.3
+0.1
+0.2
control
PDB
-0.1
+0.1
+0.9
+0.1
-0.0
control
PDB
+0.2
-0.0
+0.8
-0.1
+0.4
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