Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS03140 and DDA3937_RS03145 are separated by 163 nucleotidesDDA3937_RS03145 and DDA3937_RS03150 are separated by 71 nucleotidesDDA3937_RS03150 and DDA3937_RS03160 are separated by 628 nucleotidesDDA3937_RS03160 and DDA3937_RS03165 are separated by 127 nucleotides DDA3937_RS03140: DDA3937_RS03140 - thymidine phosphorylase, at 691,770 to 693,101 _RS03140 DDA3937_RS03145: DDA3937_RS03145 - phosphopentomutase, at 693,265 to 694,488 _RS03145 DDA3937_RS03150: DDA3937_RS03150 - purine-nucleoside phosphorylase, at 694,560 to 695,285 _RS03150 DDA3937_RS03160: DDA3937_RS03160 - VOC family protein, at 695,914 to 696,468 _RS03160 DDA3937_RS03165: DDA3937_RS03165 - LysR family transcriptional regulator, at 696,596 to 697,513 _RS03165
Group Condition DDA3937_RS03140 DDA3937_RS03145 DDA3937_RS03150 DDA3937_RS03160 DDA3937_RS03165
carbon source M9+glycerol +0.2 N.D. +0.2 -2.1 -0.0
carbon source M9+glycerol +0.1 N.D. -0.3 -1.1 -0.4
plant Stem-Norland -0.0 N.D. -0.5 -1.2 +0.2
plant Stem-Norland -0.2 N.D. -0.4 -0.8 -0.0
plant Stem-Atlantic -0.1 N.D. -0.2 -0.9 +0.0
carbon source M9+starch -0.2 N.D. -0.2 -0.9 +0.1
plant Stem-Norland +0.1 N.D. -0.2 -1.1 +0.2
plant Stem-Atlantic +0.4 N.D. -0.3 -0.8 -0.2
plant Stem-Atlantic -0.1 N.D. +0.5 -1.4 +0.2
plant Norland -0.6 N.D. -0.3 +0.2 -0.1
control LB +0.2 N.D. -0.6 +0.1 -0.2
plant Stem-Norland +0.3 N.D. -0.1 -0.7 +0.2
control LB +0.4 N.D. -0.7 -0.0 +0.0
plant Upstate +0.3 N.D. -0.8 +0.3 -0.1
plant Norland +0.2 N.D. -0.5 +0.3 -0.2
control PDB +0.5 N.D. -0.5 +0.1 -0.1
plant Norland -0.3 N.D. -0.6 +1.0 +0.1
carbon source M9+polygalacturonate -0.2 N.D. -0.3 +0.6 +0.1
plant Norland -0.2 N.D. -0.4 +0.9 +0.1
plant Atlantic +0.4 N.D. +0.1 -0.3 +0.3
carbon source M9+glucose -0.0 N.D. +0.7 -0.3 +0.1
control PDB -0.3 N.D. +0.8 +0.5 -0.4
plant Upstate +0.2 N.D. -0.2 +0.7 +0.0
carbon source M9+glucose+arginine -0.0 N.D. +0.5 +0.4 -0.1
plant Stem-Atlantic +0.3 N.D. -0.2 +0.5 +0.3
control PDB -0.2 N.D. +0.3 +0.8 +0.0
control PDB +0.4 N.D. -0.3 +1.0 +0.0
carbon source M9+glucose +0.0 N.D. +0.4 +0.7 +0.0
carbon source M9+glucose+arginine +0.2 N.D. +0.7 +0.5 +0.1
plant Upstate +0.1 N.D. +0.6 +1.2 +0.1
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