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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS02675 and DDA3937_RS02680 are separated by 900 nucleotides
DDA3937_RS02680 and DDA3937_RS02685 are separated by 122 nucleotides
DDA3937_RS02685 and DDA3937_RS02690 are separated by 140 nucleotides
DDA3937_RS02690 and DDA3937_RS02695 are separated by 161 nucleotides
DDA3937_RS02675: DDA3937_RS02675 - hypothetical protein, at 592,656 to 593,399
_RS02675
DDA3937_RS02680: DDA3937_RS02680 - hypothetical protein, at 594,300 to 594,650
_RS02680
DDA3937_RS02685: DDA3937_RS02685 - hypothetical protein, at 594,773 to 594,961
_RS02685
DDA3937_RS02690: DDA3937_RS02690 - integrase arm-type DNA-binding domain-containing protein, at 595,102 to 596,361
_RS02690
DDA3937_RS02695: DDA3937_RS02695 - tRNA-Phe, at 596,523 to 596,598
_RS02695
Group
Condition
DDA3937
_RS02675
DDA3937
_RS02680
DDA3937
_RS02685
DDA3937
_RS02690
DDA3937
_RS02695
control
PDB
+0.2
-0.5
-4.3
-0.5
N.D.
carbon source
M9+starch
+0.0
-0.2
-4.0
+0.1
N.D.
control
PDB
-0.5
+0.5
-3.4
-0.3
N.D.
carbon source
M9+starch
+0.0
-0.0
-2.9
-0.0
N.D.
carbon source
M9+glucose+arginine
-0.0
+0.2
-2.9
+0.1
N.D.
carbon source
M9+glucose+arginine
+0.1
-0.0
-2.6
-0.1
N.D.
carbon source
M9+glucose
-0.2
+0.1
-2.4
-0.1
N.D.
carbon source
M9+glucose+arginine
-0.2
+0.3
-2.5
+0.1
N.D.
carbon source
M9+polygalacturonate
-0.4
-0.1
-2.0
+0.1
N.D.
carbon source
M9+glucose
-0.0
+0.3
-2.7
+0.2
N.D.
carbon source
M9+polygalacturonate
+0.0
-0.2
-2.0
+0.0
N.D.
carbon source
M9+glucose
-0.0
+0.2
-2.4
+0.1
N.D.
carbon source
M9+sucrose
-0.1
+0.1
-2.1
+0.1
N.D.
plant
Stem-Atlantic
+0.3
-0.4
-1.7
+0.2
N.D.
plant
Norland
-0.3
-0.1
+1.5
-0.2
N.D.
control
PDB
-0.1
+0.1
+1.7
-0.3
N.D.
control
PDB
-0.3
+0.5
+1.1
+0.1
N.D.
plant
Upstate
-0.6
+0.2
+2.0
-0.2
N.D.
plant
Atlantic
+0.1
+0.3
+1.8
-0.1
N.D.
control
PDB
+0.2
+0.3
+1.3
+0.4
N.D.
plant
Atlantic
-0.0
+0.4
+2.1
-0.1
N.D.
carbon source
M9+glycerol
+0.2
-0.2
+3.2
+0.1
N.D.
carbon source
M9+glycerol
-0.0
+0.3
+3.7
-0.2
N.D.
plant
Atlantic
-0.0
+0.4
+3.5
-0.1
N.D.
plant
Atlantic
-0.0
+0.3
+3.6
-0.2
N.D.
carbon source
M9+glycerol
+0.1
-0.0
+4.0
-0.2
N.D.
carbon source
M9+glycerol
-0.3
-0.2
+4.3
+0.0
N.D.
plant
Atlantic
+0.6
-0.3
+4.0
+0.0
N.D.
carbon source
M9+glycerol
-0.2
-0.7
+5.5
-0.3
N.D.
carbon source
M9+glycerol
+0.2
-0.2
+4.8
-0.0
N.D.
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DDA3937_RS02685
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