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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS02595 and DDA3937_RS02600 are separated by 9 nucleotides
DDA3937_RS02600 and DDA3937_RS02605 are separated by 1 nucleotides
DDA3937_RS02605 and DDA3937_RS02610 are separated by 15 nucleotides
DDA3937_RS02610 and DDA3937_RS02615 are separated by 38 nucleotides
DDA3937_RS02595: DDA3937_RS02595 - glycosyltransferase, at 575,740 to 576,729
_RS02595
DDA3937_RS02600: DDA3937_RS02600 - glycosyltransferase family 4 protein, at 576,739 to 577,950
_RS02600
DDA3937_RS02605: DDA3937_RS02605 - glycosyltransferase family 4 protein, at 577,952 to 579,067
_RS02605
DDA3937_RS02610: DDA3937_RS02610 - hypothetical protein, at 579,083 to 579,490
_RS02610
DDA3937_RS02615: DDA3937_RS02615 - DUF4832 domain-containing protein, at 579,529 to 580,923
_RS02615
Group
Condition
DDA3937
_RS02595
DDA3937
_RS02600
DDA3937
_RS02605
DDA3937
_RS02610
DDA3937
_RS02615
plant
Stem-Norland
-1.5
-1.3
-0.6
-0.9
+0.2
plant
Stem-Atlantic
-1.3
-0.9
-0.7
-1.1
+0.1
plant
Stem-Atlantic
-1.0
-0.8
-0.3
-1.6
-0.1
plant
Stem-Atlantic
-1.1
-1.0
-0.5
-1.3
+0.3
plant
Stem-Norland
-0.6
-1.4
-0.8
-1.1
+0.2
plant
Stem-Atlantic
-1.1
-1.0
-0.4
-1.1
-0.0
plant
Stem-Atlantic
-1.2
-0.5
-0.5
-1.2
-0.0
plant
Stem-Norland
-1.0
-1.3
-0.6
-0.8
+0.3
control
PDB
-1.1
-0.9
-0.1
-0.5
-0.1
plant
Stem-Norland
-1.2
-0.8
-0.3
-0.5
+0.1
plant
Stem-Norland
-0.6
-1.1
-0.2
-0.8
-0.1
control
PDB
-0.6
-0.5
+0.0
-0.6
+0.1
control
PDB
-0.5
-0.9
+0.3
-0.5
+0.3
control
PDB
-0.4
-0.6
-0.0
-0.3
+0.0
plant
Atlantic
-0.7
-0.4
+0.1
-0.1
+0.1
plant
Upstate
-0.4
-0.3
-0.4
-0.1
+0.1
control
PDB
-0.4
-0.6
+0.2
-0.4
+0.3
control
PDB
-0.9
+0.1
-0.1
+0.0
-0.1
plant
Norland
-0.4
-0.5
+0.0
+0.0
+0.1
plant
Upstate
-0.4
-0.4
-0.2
+0.1
+0.1
control
LB
-0.1
-0.3
+0.1
-0.4
+0.0
plant
Upstate
-0.2
-0.1
-0.1
-0.3
+0.3
plant
Atlantic
-0.5
+0.3
+0.0
-0.3
+0.0
plant
Atlantic
-0.7
+0.7
-0.2
+0.5
+0.1
stress
7.5mM_PTB
+0.1
+0.3
+0.4
-0.3
-0.1
carbon source
M9+glucose+arginine
+0.4
+0.4
+0.1
+0.2
-0.1
carbon source
M9+glucose+arginine
+0.6
+0.2
+0.2
+0.1
+0.0
carbon source
M9+glucose+arginine
+0.6
+0.4
+0.3
-0.0
-0.2
carbon source
M9+glucose
+0.7
+0.3
+0.4
-0.1
-0.0
plant
Norland
+0.5
+1.0
+0.5
-0.0
+0.3
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DDA3937_RS02605
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