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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS02360 and DDA3937_RS02365 overlap by 23 nucleotides
DDA3937_RS02365 and DDA3937_RS02370 are separated by 190 nucleotides
DDA3937_RS02370 and DDA3937_RS02375 are separated by 926 nucleotides
DDA3937_RS02375 and DDA3937_RS02380 are separated by 283 nucleotides
DDA3937_RS02360: DDA3937_RS02360 - ABC transporter permease, at 522,201 to 523,166
_RS02360
DDA3937_RS02365: DDA3937_RS02365 - ABC transporter substrate-binding protein, at 523,144 to 524,772
_RS02365
DDA3937_RS02370: DDA3937_RS02370 - DUF1440 domain-containing protein, at 524,963 to 525,505
_RS02370
DDA3937_RS02375: DDA3937_RS02375 - IS110-like element ISEch4 family transposase, at 526,432 to 527,436
_RS02375
DDA3937_RS02380: DDA3937_RS02380 - hypothetical protein, at 527,720 to 528,298
_RS02380
Group
Condition
DDA3937
_RS02360
DDA3937
_RS02365
DDA3937
_RS02370
DDA3937
_RS02375
DDA3937
_RS02380
carbon source
M9+glucose+arginine
-1.4
-0.6
-0.4
N.D.
+0.2
carbon source
M9+glucose+arginine
-0.8
-0.7
-0.3
N.D.
+0.0
carbon source
M9+glucose+arginine
-1.1
-0.6
-0.2
N.D.
+0.1
carbon source
M9+glucose
-1.1
-0.3
-0.2
N.D.
+0.2
carbon source
M9+glucose
-0.8
-0.4
-0.1
N.D.
-0.2
plant
Stem-Norland
+0.1
-0.4
-0.6
N.D.
-0.2
plant
Atlantic
-0.4
-0.4
-0.2
N.D.
-0.1
control
PDB
-0.2
-0.1
-0.4
N.D.
-0.2
plant
Stem-Norland
-0.6
-0.2
+0.0
N.D.
-0.1
carbon source
M9+glucose
-0.4
-0.4
-0.2
N.D.
+0.2
carbon source
M9+polygalacturonate
-0.5
-0.1
-0.3
N.D.
-0.0
plant
Stem-Atlantic
-0.3
-0.4
+0.1
N.D.
-0.2
carbon source
M9+sucrose
-0.7
+0.1
-0.3
N.D.
+0.1
carbon source
M9+sucrose
-0.4
-0.1
-0.3
N.D.
+0.1
plant
Stem-Atlantic
-0.2
+0.1
-0.4
N.D.
-0.2
carbon source
M9+starch
-0.4
-0.1
-0.3
N.D.
+0.2
carbon source
M9+starch
-0.3
+0.0
-0.4
N.D.
+0.2
plant
Stem-Atlantic
-0.4
+0.2
-0.3
N.D.
+0.1
plant
Stem-Norland
+0.4
-0.3
+0.0
N.D.
-0.4
plant
Norland
-0.9
+0.5
-0.0
N.D.
+0.1
plant
Norland
+0.2
+0.3
-0.5
N.D.
-0.2
carbon source
M9+glycerol
-0.4
+0.1
+0.2
N.D.
+0.3
plant
Atlantic
-0.2
+0.4
+0.3
N.D.
-0.2
control
PDB
+0.4
+0.2
+0.1
N.D.
-0.2
plant
Stem-Norland
+0.4
-0.3
+0.5
N.D.
-0.2
plant
Norland
+0.2
+0.5
-0.1
N.D.
+0.0
control
PDB
+0.7
+0.0
+0.1
N.D.
-0.0
plant
Atlantic
+1.7
-0.1
-0.2
N.D.
+0.0
plant
Atlantic
+1.3
+0.1
-0.1
N.D.
+0.3
plant
Atlantic
+1.4
+0.3
+0.4
N.D.
+0.2
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