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Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS02200 and DDA3937_RS02205 are separated by 102 nucleotides
DDA3937_RS02205 and DDA3937_RS02210 are separated by 71 nucleotides
DDA3937_RS02210 and DDA3937_RS02215 are separated by 113 nucleotides
DDA3937_RS02215 and DDA3937_RS02220 are separated by 70 nucleotides
DDA3937_RS02200: DDA3937_RS02200 - SDR family oxidoreductase, at 488,635 to 489,432
_RS02200
DDA3937_RS02205: DDA3937_RS02205 - type-1Aa cytolytic delta-endotoxin, at 489,535 to 490,194
_RS02205
DDA3937_RS02210: DDA3937_RS02210 - type-1Ba cytolytic delta-endotoxin, at 490,266 to 490,877
_RS02210
DDA3937_RS02215: DDA3937_RS02215 - type-2Aa cytolytic delta-endotoxin, at 490,991 to 491,590
_RS02215
DDA3937_RS02220: DDA3937_RS02220 - delta-endotoxin CytB, at 491,661 to 492,296
_RS02220
Group
Condition
DDA3937
_RS02200
DDA3937
_RS02205
DDA3937
_RS02210
DDA3937
_RS02215
DDA3937
_RS02220
carbon source
M9+polygalacturonate
+0.0
-0.0
-2.0
-0.8
+0.0
carbon source
M9+polygalacturonate
-0.2
-0.3
-1.5
-0.6
+0.1
carbon source
M9+polygalacturonate
-0.1
+0.2
-1.9
-0.6
-0.2
control
PDB
-0.2
-0.7
-0.5
-0.3
-0.3
control
PDB
-0.5
-0.3
-0.4
-0.6
-0.1
carbon source
M9+glucose
-0.1
-0.1
-1.1
-0.5
-0.1
plant
Upstate
-0.1
-0.2
-0.9
-0.7
+0.1
control
PDB
-0.2
-0.2
-0.7
-0.2
-0.4
carbon source
M9+starch
-0.1
-0.3
-0.9
-0.3
-0.1
carbon source
M9+starch
-0.1
-0.2
-0.7
-0.2
-0.4
plant
Stem-Norland
-0.1
+0.2
-1.3
-0.3
-0.0
plant
Upstate
-0.1
+0.2
-1.3
-0.2
-0.0
carbon source
M9+starch
-0.2
+0.1
-1.0
-0.0
-0.3
plant
Stem-Atlantic
-0.2
+0.1
-0.2
-0.9
-0.2
stress
1.88mM_PTB
-0.0
-0.2
-0.7
-0.2
-0.3
plant
Upstate
-0.0
-0.3
-0.9
-0.1
+0.0
control
PDB
-0.0
-0.5
-0.4
-0.2
-0.1
plant
Upstate
+0.1
-0.0
-1.5
-0.1
+0.2
plant
Atlantic
+0.1
-0.1
-0.9
-0.4
+0.1
plant
Norland
-0.2
+0.1
-0.7
-0.2
-0.0
control
LB
+0.1
-0.3
-0.5
-0.2
-0.2
control
PDB
+0.3
+0.0
-0.9
-0.5
+0.0
plant
Norland
+0.0
-0.3
-0.3
-0.5
+0.2
plant
Atlantic
-0.1
+0.4
-0.8
-0.3
+0.1
plant
Stem-Atlantic
-0.1
-0.2
-0.8
-0.0
+0.3
plant
Stem-Norland
-0.0
+0.4
-1.0
+0.2
-0.3
plant
Norland
+0.2
+0.1
-0.6
-0.5
+0.1
plant
Stem-Norland
-0.4
-0.1
-0.5
+0.3
+0.2
plant
Norland
+0.3
+0.3
-0.4
+0.2
-0.4
plant
Stem-Norland
+0.2
+0.4
-0.4
-0.2
+0.6
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