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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS02070 and DDA3937_RS02075 are separated by 10 nucleotides
DDA3937_RS02075 and DDA3937_RS02080 are separated by 444 nucleotides
DDA3937_RS02080 and DDA3937_RS02085 are separated by 471 nucleotides
DDA3937_RS02085 and DDA3937_RS02090 are separated by 193 nucleotides
DDA3937_RS02070: DDA3937_RS02070 - methyltransferase domain-containing protein, at 464,868 to 465,587
_RS02070
DDA3937_RS02075: DDA3937_RS02075 - YjhX family toxin, at 465,598 to 465,855
_RS02075
DDA3937_RS02080: DDA3937_RS02080 - hypothetical protein, at 466,300 to 466,638
_RS02080
DDA3937_RS02085: DDA3937_RS02085 - hypothetical protein, at 467,110 to 467,913
_RS02085
DDA3937_RS02090: DDA3937_RS02090 - Lrp/AsnC family transcriptional regulator, at 468,107 to 468,589
_RS02090
Group
Condition
DDA3937
_RS02070
DDA3937
_RS02075
DDA3937
_RS02080
DDA3937
_RS02085
DDA3937
_RS02090
carbon source
M9+glucose+arginine
-0.0
-0.3
N.D.
-0.3
-0.1
control
PDB
-0.2
-0.2
N.D.
+0.3
-0.5
control
PDB
+0.0
-0.1
N.D.
+0.3
-0.6
plant
Atlantic
-0.2
-0.2
N.D.
+0.2
-0.2
carbon source
M9+glycerol
-0.3
-0.3
N.D.
+0.2
-0.0
carbon source
M9+glycerol
-0.1
-0.0
N.D.
+0.1
-0.2
control
PDB
-0.1
-0.5
N.D.
+0.4
+0.0
carbon source
M9+glycerol
+0.1
-0.2
N.D.
+0.1
-0.2
control
PDB
-0.0
+0.2
N.D.
+0.3
-0.6
plant
Norland
-0.2
+0.1
N.D.
+0.0
+0.2
plant
Stem-Atlantic
-0.1
+0.0
N.D.
-0.3
+0.5
plant
Atlantic
+0.2
+0.1
N.D.
-0.0
-0.2
carbon source
M9+glucose
+0.1
+0.2
N.D.
-0.1
-0.1
carbon source
M9+glycerol
+0.2
-0.2
N.D.
+0.2
-0.1
control
PDB
+0.0
+0.4
N.D.
+0.1
-0.4
plant
Stem-Atlantic
+0.2
+0.1
N.D.
+0.1
-0.2
plant
Norland
-0.2
+0.1
N.D.
+0.2
+0.2
plant
Upstate
+0.1
+0.4
N.D.
+0.1
-0.2
plant
Stem-Norland
+0.1
+0.1
N.D.
+0.4
-0.1
plant
Norland
-0.1
+0.2
N.D.
+0.3
+0.1
control
PDB
-0.0
+0.4
N.D.
+0.4
-0.3
plant
Upstate
+0.1
+0.3
N.D.
-0.0
+0.2
plant
Atlantic
+0.4
+0.2
N.D.
+0.1
-0.1
plant
Atlantic
+0.2
+0.1
N.D.
+0.1
+0.2
plant
Stem-Norland
+0.2
+0.1
N.D.
+0.3
+0.1
plant
Norland
+0.2
+0.5
N.D.
+0.1
-0.2
plant
Stem-Atlantic
+0.2
+0.2
N.D.
+0.0
+0.2
plant
Atlantic
+0.3
+0.1
N.D.
+0.3
-0.0
plant
Norland
+0.2
+0.3
N.D.
+0.5
-0.2
plant
Stem-Norland
+0.4
+0.4
N.D.
-0.2
+0.1
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