Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS01820 and DDA3937_RS01825 are separated by 4 nucleotidesDDA3937_RS01825 and DDA3937_RS01830 are separated by 130 nucleotidesDDA3937_RS01830 and DDA3937_RS01835 are separated by 128 nucleotidesDDA3937_RS01835 and DDA3937_RS01840 are separated by 49 nucleotides DDA3937_RS01820: DDA3937_RS01820 - tol-pal system-associated acyl-CoA thioesterase, at 404,652 to 405,500 _RS01820 DDA3937_RS01825: DDA3937_RS01825 - TonB system transport protein ExbD, at 405,505 to 405,924 _RS01825 DDA3937_RS01830: DDA3937_RS01830 - Qnr family pentapeptide repeat protein, at 406,055 to 406,705 _RS01830 DDA3937_RS01835: DDA3937_RS01835 - LacI family DNA-binding transcriptional regulator, at 406,834 to 407,853 _RS01835 DDA3937_RS01840: DDA3937_RS01840 - sucrose-6-phosphate hydrolase, at 407,903 to 409,315 _RS01840
Group Condition DDA3937_RS01820 DDA3937_RS01825 DDA3937_RS01830 DDA3937_RS01835 DDA3937_RS01840
plant Stem-Norland -3.3 N.D. -0.0 -0.7 +0.0
plant Stem-Norland -3.3 N.D. -0.1 -0.2 +0.0
plant Stem-Atlantic -3.0 N.D. -0.5 +0.1 +0.1
plant Stem-Norland -3.4 N.D. +0.1 -0.4 +0.4
plant Norland -2.4 N.D. +0.0 -0.5 -0.3
plant Upstate -2.7 N.D. +0.1 -0.5 +0.0
plant Stem-Norland -3.4 N.D. +0.3 -0.1 +0.3
plant Stem-Atlantic -2.9 N.D. +0.3 -0.4 +0.3
plant Stem-Atlantic -2.5 N.D. +0.3 -0.5 +0.0
plant Norland -2.6 N.D. -0.1 +0.2 -0.2
plant Stem-Atlantic -1.9 N.D. -0.2 -0.7 +0.3
plant Stem-Norland -3.2 N.D. +0.2 +0.5 +0.1
plant Upstate -2.9 N.D. +0.0 +0.5 -0.1
plant Atlantic -2.5 N.D. -0.1 +0.3 -0.1
plant Atlantic -2.7 N.D. +0.0 +0.7 -0.3
plant Atlantic -2.2 N.D. -0.1 +0.3 -0.2
carbon source M9+glucose -2.1 N.D. +0.2 +0.2 -0.5
plant Upstate -2.4 N.D. +0.2 +0.3 +0.0
plant Upstate -2.2 N.D. +0.3 +0.4 -0.1
plant Atlantic -2.7 N.D. -0.1 +1.3 -0.1
plant Atlantic -2.2 N.D. -0.1 +0.6 +0.4
plant Upstate -2.1 N.D. +0.4 +1.3 -0.8
carbon source M9+glucose -1.7 N.D. +0.4 +0.8 -0.5
plant Atlantic -2.1 N.D. +0.2 +1.0 -0.0
plant Norland -2.1 N.D. +0.3 +1.0 +0.3
plant Upstate -1.8 N.D. +0.0 +1.1 +0.2
control PDB +2.1 N.D. -0.4 -0.6 -0.5
control PDB +1.3 N.D. -0.2 +1.3 -0.0
control PDB +1.2 N.D. -0.0 +1.5 -0.1
control PDB +2.4 N.D. -0.3 +0.7 -0.0
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