Fitness for 5 genes in Dickeya dadantii 3937

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500 ntDDA3937_RS01180 and DDA3937_RS01185 are separated by 103 nucleotidesDDA3937_RS01185 and DDA3937_RS01190 are separated by 55 nucleotidesDDA3937_RS01190 and DDA3937_RS01195 overlap by 1 nucleotidesDDA3937_RS01195 and DDA3937_RS01200 are separated by 91 nucleotides DDA3937_RS01180: DDA3937_RS01180 - Rsd/AlgQ family anti-sigma factor, at 269,940 to 270,389 _RS01180 DDA3937_RS01185: DDA3937_RS01185 - NAD(+) diphosphatase, at 270,493 to 271,266 _RS01185 DDA3937_RS01190: DDA3937_RS01190 - uroporphyrinogen decarboxylase, at 271,322 to 272,395 _RS01190 DDA3937_RS01195: DDA3937_RS01195 - deoxyribonuclease V, at 272,395 to 273,069 _RS01195 DDA3937_RS01200: DDA3937_RS01200 - YjaG family protein, at 273,161 to 273,751 _RS01200
Group Condition DDA3937_RS01180 DDA3937_RS01185 DDA3937_RS01190 DDA3937_RS01195 DDA3937_RS01200
carbon source M9+glucose -0.6 -0.2 N.D. -0.4 -2.2
carbon source M9+glucose -0.5 -0.1 N.D. -0.4 -2.0
carbon source M9+glucose+arginine -0.5 -0.2 N.D. -0.3 -1.8
carbon source M9+glucose+arginine -0.6 -0.1 N.D. -0.0 -1.7
carbon source M9+glucose+arginine -0.4 -0.1 N.D. -0.1 -1.8
carbon source M9+glucose -0.2 -0.0 N.D. -0.2 -1.7
carbon source M9+starch +0.1 -0.3 N.D. -0.6 -0.4
control LB -0.0 -0.4 N.D. -0.2 -0.2
carbon source M9+polygalacturonate -0.1 -0.2 N.D. -0.3 -0.2
carbon source M9+polygalacturonate +0.0 -0.3 N.D. -0.2 -0.2
control LB +0.1 -0.4 N.D. -0.0 -0.2
plant Stem-Norland +0.2 +0.1 N.D. -0.2 -0.3
plant Stem-Norland +0.2 -0.2 N.D. +0.1 -0.3
plant Stem-Atlantic +0.0 +0.3 N.D. -0.6 +0.2
plant Stem-Atlantic -0.0 +0.4 N.D. +0.1 -0.4
plant Upstate +0.1 +0.2 N.D. -0.5 +0.2
plant Stem-Atlantic +0.2 +0.5 N.D. -0.4 -0.2
control PDB -0.1 +0.2 N.D. +0.2 -0.3
carbon source M9+glycerol +0.1 -0.3 N.D. +0.4 -0.1
plant Stem-Norland +0.2 +0.3 N.D. -0.3 -0.0
control PDB +0.3 +0.1 N.D. -0.3 +0.2
plant Norland -0.1 -0.1 N.D. +0.4 +0.4
plant Stem-Atlantic +0.4 +0.5 N.D. -0.2 -0.2
plant Norland -0.0 +0.6 N.D. -0.3 +0.3
plant Atlantic +0.1 +0.4 N.D. +0.2 -0.1
plant Norland -0.0 +0.6 N.D. -0.1 +0.3
control PDB -0.1 +0.5 N.D. +0.2 +0.3
plant Upstate +0.3 +0.3 N.D. +0.0 +0.2
plant Atlantic +0.1 +0.3 N.D. +0.4 +0.1
control PDB +0.4 +0.2 N.D. +0.7 +0.1
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