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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dadantii 3937
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
DDA3937_RS00145 and DDA3937_RS00150 are separated by 7 nucleotides
DDA3937_RS00150 and DDA3937_RS00155 are separated by 33 nucleotides
DDA3937_RS00155 and DDA3937_RS00160 are separated by 63 nucleotides
DDA3937_RS00160 and DDA3937_RS00165 are separated by 155 nucleotides
DDA3937_RS00145: DDA3937_RS00145 - glucose-1-phosphatase, at 34,898 to 35,509
_RS00145
DDA3937_RS00150: DDA3937_RS00150 - D-tyrosyl-tRNA(Tyr) deacylase, at 35,517 to 35,954
_RS00150
DDA3937_RS00155: DDA3937_RS00155 - fatty acid biosynthesis protein FabY, at 35,988 to 36,929
_RS00155
DDA3937_RS00160: DDA3937_RS00160 - AsmA family protein, at 36,993 to 38,735
_RS00160
DDA3937_RS00165: DDA3937_RS00165 - uracil-xanthine permease, at 38,891 to 40,279
_RS00165
Group
Condition
DDA3937
_RS00145
DDA3937
_RS00150
DDA3937
_RS00155
DDA3937
_RS00160
DDA3937
_RS00165
control
PDB
+0.3
-0.8
-1.4
-0.2
-0.2
plant
Stem-Norland
-0.3
-0.6
-0.6
-0.0
-0.6
carbon source
M9+glycerol
-0.3
-0.6
-0.7
-0.0
-0.1
carbon source
M9+glycerol
+0.1
-0.5
-0.8
-0.2
-0.2
carbon source
M9+glycerol
+0.0
-0.4
-1.0
-0.0
-0.3
carbon source
M9+glycerol
-0.1
-0.4
-0.8
-0.1
-0.3
carbon source
M9+starch
+0.0
-0.1
-0.7
-0.2
-0.3
control
PDB
-0.4
+0.0
-0.8
+0.1
-0.1
carbon source
M9+starch
-0.1
-0.1
-1.0
-0.0
-0.1
carbon source
M9+glycerol
+0.1
-0.4
-0.9
-0.0
-0.0
carbon source
M9+sucrose
-0.3
-0.2
-0.5
-0.1
-0.1
carbon source
M9+starch
+0.0
-0.3
-0.7
-0.1
-0.1
plant
Stem-Atlantic
+0.2
+0.1
-0.6
+0.0
-0.8
control
PDB
-0.1
-0.2
-0.6
+0.4
-0.3
control
PDB
+0.2
-0.5
-0.5
-0.0
-0.0
carbon source
M9+glycerol
+0.3
-0.1
-0.6
+0.0
-0.3
plant
Stem-Norland
+0.7
+0.1
-0.8
-0.1
-0.5
plant
Upstate
-0.0
-0.2
-0.2
-0.4
+0.3
plant
Atlantic
+0.3
-0.4
-0.4
-0.0
+0.2
plant
Atlantic
-0.1
+0.4
-0.5
-0.1
+0.0
plant
Norland
+0.4
-0.3
-0.3
+0.1
-0.1
plant
Atlantic
+0.3
-0.1
-0.5
-0.2
+0.4
plant
Norland
+0.2
-0.1
-0.5
-0.1
+0.4
stress
3.75mM_PTB
+0.3
+0.3
-0.4
-0.2
+0.2
stress
3.75mM_PTB
+0.4
+0.3
-0.2
-0.2
-0.1
plant
Norland
+0.4
+0.1
+0.1
-0.1
+0.3
carbon source
M9+glucose+arginine
+0.6
+0.1
+0.1
+0.2
-0.1
stress
7.5mM_PTB
+1.0
+0.2
-0.2
-0.1
+0.1
stress
7.5mM_PTB
+1.2
+0.1
-0.1
-0.0
-0.1
stress
7.5mM_PTB
+1.1
+0.3
-0.1
-0.0
+0.2
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DDA3937_RS00155
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