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Cofit
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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500 nt
CCNA_R0038 and CCNA_01453 are separated by 26 nucleotides
CCNA_01453 and CCNA_R0039 are separated by 28 nucleotides
CCNA_R0039 and CCNA_01457 are separated by 690 nucleotides
CCNA_01457 and CCNA_01458 are separated by 2 nucleotides
CCNA_R0038: CCNA_R0038 - tRNA-Pro, at 1,566,421 to 1,566,497
_R0038
CCNA_01453: CCNA_01453 - electron transport complex I subunit, NADH-ubiquinone oxidoreductase, at 1,566,524 to 1,566,829
_01453
CCNA_R0039: CCNA_R0039 - tRNA-Arg, at 1,566,858 to 1,566,934
_R0039
CCNA_01457: CCNA_01457 - hypothetical protein, at 1,567,625 to 1,567,876
_01457
CCNA_01458: CCNA_01458 - hypothetical protein, at 1,567,879 to 1,568,187
_01458
Group
Condition
CCNA
_R0038
CCNA
_01453
CCNA
_R0039
CCNA
_01457
CCNA
_01458
stress
PYE with CHIR-090 40 ug/mL
N.D.
-0.2
N.D.
-0.1
-0.4
stress
PYE with CHIR-090 10 ug/mL
N.D.
-0.1
N.D.
+0.2
-0.3
stress
PYE with CHIR-090 4 ug/mL
N.D.
-0.1
N.D.
+0.0
+0.0
no stress control
PYE no stress control
N.D.
+0.1
N.D.
-0.0
-0.2
stress
PYE with Dimethyl Sulfoxide 0.4 %
N.D.
+0.1
N.D.
-0.0
-0.2
stress
PYE with Dimethyl Sulfoxide 0.4 %
N.D.
+0.2
N.D.
-0.1
+0.0
stress
PYE with CHIR-090 10 ug/mL
N.D.
-0.6
N.D.
+0.3
+0.5
stress
PYE with CHIR-090 40 ug/mL
N.D.
+0.2
N.D.
-0.1
+0.1
stress
PYE with CHIR-090 10 ug/mL
N.D.
-0.1
N.D.
-0.0
+0.4
no stress control
PYE no stress control
N.D.
+0.1
N.D.
+0.1
+0.1
no stress control
PYE no stress control
N.D.
+0.0
N.D.
+0.4
+0.0
stress
PYE with CHIR-090 4 ug/mL
N.D.
+0.3
N.D.
+0.1
+0.0
stress
PYE with CHIR-090 4 ug/mL
N.D.
+0.2
N.D.
+0.3
+0.2
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
N.D.
+0.3
N.D.
+0.2
+0.4
stress
PYE with CHIR-090 40 ug/mL
N.D.
+0.6
N.D.
+0.5
+0.4
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