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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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Top 15 experiments (either direction), sorted by average fitness
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500 nt
CCNA_03610 and CCNA_03611 are separated by 44 nucleotides
CCNA_03611 and CCNA_03612 are separated by 19 nucleotides
CCNA_03612 and CCNA_03613 are separated by 399 nucleotides
CCNA_03613 and CCNA_03614 are separated by 59 nucleotides
CCNA_03610: CCNA_03610 - methyltransferase, at 3,764,334 to 3,765,164
_03610
CCNA_03611: CCNA_03611 - glutathione-regulated potassium-efflux system protein kefC, at 3,765,209 to 3,767,008
_03611
CCNA_03612: CCNA_03612 - HTH XRE-family transcriptional regulator, at 3,767,028 to 3,767,276
_03612
CCNA_03613: CCNA_03613 - 3-hydroxybutyryl-CoA dehydratase, at 3,767,676 to 3,768,128
_03613
CCNA_03614: CCNA_03614 - hypothetical protein, at 3,768,188 to 3,768,616
_03614
Group
Condition
CCNA
_03610
CCNA
_03611
CCNA
_03612
CCNA
_03613
CCNA
_03614
no stress control
PYE no stress control
-0.0
-0.2
+0.2
-0.1
-0.2
no stress control
PYE no stress control
+0.0
-0.2
+0.2
+0.0
-0.1
stress
PYE with CHIR-090 10 ug/mL
-0.1
-0.2
+0.0
+0.1
+0.2
no stress control
PYE no stress control
+0.1
-0.2
+0.3
-0.1
+0.0
stress
PYE with CHIR-090 4 ug/mL
-0.1
-0.2
+0.3
+0.0
+0.0
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.0
-0.2
+0.4
-0.1
+0.0
stress
PYE with CHIR-090 4 ug/mL
-0.0
-0.2
+0.3
+0.0
+0.1
stress
PYE with CHIR-090 10 ug/mL
-0.0
-0.2
+0.3
-0.1
+0.2
stress
PYE with CHIR-090 40 ug/mL
-0.1
-0.2
+0.3
+0.1
+0.1
stress
PYE with CHIR-090 40 ug/mL
+0.0
-0.2
+0.3
-0.1
+0.2
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
+0.1
-0.2
+0.5
-0.1
+0.0
stress
PYE with CHIR-090 4 ug/mL
+0.1
-0.1
+0.3
-0.0
+0.0
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.0
-0.2
+0.4
+0.0
+0.2
stress
PYE with CHIR-090 10 ug/mL
+0.0
-0.2
+0.3
+0.2
+0.1
stress
PYE with CHIR-090 40 ug/mL
+0.0
-0.2
+0.7
-0.2
+0.2
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