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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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500 nt
CCNA_03583 and CCNA_03584 are separated by 139 nucleotides
CCNA_03584 and CCNA_03585 are separated by 79 nucleotides
CCNA_03585 and CCNA_03586 overlap by 4 nucleotides
CCNA_03586 and CCNA_03587 are separated by 59 nucleotides
CCNA_03583: CCNA_03583 - hypothetical protein, at 3,739,668 to 3,739,859
_03583
CCNA_03584: CCNA_03584 - histidine phosphotransferase ChpT, at 3,739,999 to 3,740,676
_03584
CCNA_03585: CCNA_03585 - chemotaxis receiver domain protein CheYIV, at 3,740,756 to 3,741,133
_03585
CCNA_03586: CCNA_03586 - chemotaxis protein methyltransferase, at 3,741,130 to 3,741,960
_03586
CCNA_03587: CCNA_03587 - entericidin B-like protein, at 3,742,020 to 3,742,163
_03587
Group
Condition
CCNA
_03583
CCNA
_03584
CCNA
_03585
CCNA
_03586
CCNA
_03587
no stress control
PYE no stress control
-0.8
N.D.
-0.0
+0.2
+0.1
stress
PYE with CHIR-090 10 ug/mL
-0.4
N.D.
-0.0
-0.2
+0.1
stress
PYE with CHIR-090 10 ug/mL
-0.5
N.D.
-0.3
+0.2
+0.1
stress
PYE with CHIR-090 40 ug/mL
-0.4
N.D.
-0.1
+0.1
+0.2
stress
PYE with CHIR-090 4 ug/mL
-0.1
N.D.
-0.0
+0.1
-0.1
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
-0.4
N.D.
-0.0
-0.0
+0.3
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.4
N.D.
-0.1
+0.1
+0.4
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.1
N.D.
-0.1
+0.1
+0.2
stress
PYE with CHIR-090 40 ug/mL
-0.2
N.D.
+0.0
+0.4
-0.2
stress
PYE with CHIR-090 4 ug/mL
-0.3
N.D.
+0.0
+0.4
+0.0
stress
PYE with CHIR-090 10 ug/mL
-0.5
N.D.
-0.0
+0.1
+0.7
stress
PYE with CHIR-090 4 ug/mL
-0.2
N.D.
-0.2
+0.2
+0.4
no stress control
PYE no stress control
-0.2
N.D.
-0.2
+0.3
+0.4
stress
PYE with CHIR-090 40 ug/mL
+0.1
N.D.
-0.1
+0.1
+0.4
no stress control
PYE no stress control
-0.1
N.D.
-0.0
+0.3
+0.4
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