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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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Top 15 experiments (either direction), sorted by average fitness
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500 nt
CCNA_03462 and CCNA_03463 overlap by 4 nucleotides
CCNA_03463 and CCNA_03464 are separated by 118 nucleotides
CCNA_03464 and CCNA_03465 are separated by 19 nucleotides
CCNA_03465 and CCNA_03466 are separated by 383 nucleotides
CCNA_03462: CCNA_03462 - glycine cleavage system protein P, C-terminal domain, at 3,624,696 to 3,626,276
_03462
CCNA_03463: CCNA_03463 - glycine cleavage system protein P, N-terminal domain, at 3,626,273 to 3,627,619
_03463
CCNA_03464: CCNA_03464 - glycine cleavage system H protein, at 3,627,738 to 3,628,103
_03464
CCNA_03465: CCNA_03465 - glycine cleavage system aminomethyltransferase T, at 3,628,123 to 3,629,250
_03465
CCNA_03466: CCNA_03466 - ORF6N domain protein, at 3,629,634 to 3,630,437
_03466
Group
Condition
CCNA
_03462
CCNA
_03463
CCNA
_03464
CCNA
_03465
CCNA
_03466
no stress control
PYE no stress control
-0.3
+0.0
-1.4
-0.4
+0.1
stress
PYE with CHIR-090 4 ug/mL
-0.1
-0.4
-1.0
-0.3
+0.0
no stress control
PYE no stress control
-0.3
-0.2
-1.0
-0.2
-0.1
no stress control
PYE no stress control
-0.3
-0.2
-0.6
-0.2
-0.1
stress
PYE with CHIR-090 4 ug/mL
-0.3
-0.5
-0.2
-0.3
+0.0
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.2
-0.3
-0.3
-0.3
-0.2
stress
PYE with CHIR-090 40 ug/mL
-0.4
+0.2
-0.7
-0.2
+0.0
stress
PYE with CHIR-090 10 ug/mL
+0.0
-0.6
-0.0
-0.2
-0.1
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.0
-0.4
+0.2
-0.6
+0.1
stress
PYE with CHIR-090 40 ug/mL
-0.0
-0.3
-0.3
-0.2
+0.2
stress
PYE with CHIR-090 10 ug/mL
-0.2
-0.3
+0.2
-0.2
-0.1
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
-0.2
-0.3
+0.4
-0.3
+0.0
stress
PYE with CHIR-090 40 ug/mL
-0.0
-0.3
+0.3
-0.3
+0.0
stress
PYE with CHIR-090 10 ug/mL
-0.2
-0.0
+0.1
-0.2
+0.2
stress
PYE with CHIR-090 4 ug/mL
+0.0
-0.2
+0.2
-0.3
+0.2
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