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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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Top 15 experiments (either direction), sorted by average fitness
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500 nt
CCNA_03401 and CCNA_03402 are separated by 140 nucleotides
CCNA_03402 and CCNA_03403 are separated by 75 nucleotides
CCNA_03403 and CCNA_03404 are separated by 181 nucleotides
CCNA_03404 and CCNA_03405 are separated by 10 nucleotides
CCNA_03401: CCNA_03401 - conserved hypothetical cytosolic protein, at 3,570,378 to 3,571,091
_03401
CCNA_03402: CCNA_03402 - NAD(P)H quinone oxidoreductase, PIG3 family, at 3,571,232 to 3,572,206
_03402
CCNA_03403: CCNA_03403 - small coiled-coil domain protein, at 3,572,282 to 3,572,488
_03403
CCNA_03404: CCNA_03404 - regulator of CtrA degradation RcdA, at 3,572,670 to 3,573,179
_03404
CCNA_03405: CCNA_03405 - rpsU-divergently transcribed protein, at 3,573,190 to 3,573,867
_03405
Group
Condition
CCNA
_03401
CCNA
_03402
CCNA
_03403
CCNA
_03404
CCNA
_03405
stress
PYE with CHIR-090 10 ug/mL
-0.9
+0.1
+0.1
-1.2
+0.2
stress
PYE with CHIR-090 40 ug/mL
-0.8
+0.1
+0.0
-0.4
+0.3
no stress control
PYE no stress control
-0.5
+0.0
+0.4
-0.6
-0.1
stress
PYE with CHIR-090 4 ug/mL
-0.5
+0.1
-0.3
+0.3
-0.1
stress
PYE with CHIR-090 4 ug/mL
-0.8
+0.2
+0.2
-0.1
+0.1
stress
PYE with CHIR-090 10 ug/mL
-0.3
+0.0
-0.2
+0.1
+0.2
no stress control
PYE no stress control
-0.3
+0.1
-0.3
-0.1
+0.5
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
-0.3
+0.1
+0.2
-0.3
+0.2
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.2
+0.1
-0.3
+0.3
+0.2
stress
PYE with CHIR-090 40 ug/mL
-0.1
-0.0
-0.1
+0.1
+0.3
stress
PYE with CHIR-090 4 ug/mL
-0.3
-0.0
-0.0
+0.2
+0.5
no stress control
PYE no stress control
-0.3
+0.1
+0.1
+0.0
+0.5
stress
PYE with CHIR-090 40 ug/mL
-0.1
-0.0
+0.1
-0.3
+0.6
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.2
+0.1
+0.2
+0.1
+0.3
stress
PYE with CHIR-090 10 ug/mL
+0.0
+0.1
+0.2
+0.2
+0.4
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