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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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Top 15 experiments (either direction), sorted by average fitness
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500 nt
CCNA_03080 and CCNA_03884 are separated by 17 nucleotides
CCNA_03884 and CCNA_03081 are separated by 38 nucleotides
CCNA_03081 and CCNA_03082 are separated by 373 nucleotides
CCNA_03082 and CCNA_03083 are separated by 730 nucleotides
CCNA_03080: CCNA_03080 - antitoxin protein parD-4, at 3,228,577 to 3,228,828
_03080
CCNA_03884: CCNA_03884 - hypothetical protein, at 3,228,846 to 3,229,025
_03884
CCNA_03081: CCNA_03081 - hypothetical protein, at 3,229,064 to 3,229,471
_03081
CCNA_03082: CCNA_03082 - hypothetical protein, at 3,229,845 to 3,230,597
_03082
CCNA_03083: CCNA_03083 - hybrid sensor histidine kinase/receiver domain protein, at 3,231,328 to 3,233,052
_03083
Group
Condition
CCNA
_03080
CCNA
_03884
CCNA
_03081
CCNA
_03082
CCNA
_03083
stress
PYE with CHIR-090 4 ug/mL
+0.1
+0.2
-0.3
-0.1
-0.2
stress
PYE with CHIR-090 40 ug/mL
+0.1
+0.1
-0.2
-0.2
-0.0
no stress control
PYE no stress control
-0.1
-0.1
+0.1
-0.1
-0.0
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.1
-0.0
-0.1
+0.0
+0.0
no stress control
PYE no stress control
-0.2
+0.3
-0.1
-0.2
+0.1
stress
PYE with CHIR-090 4 ug/mL
-0.2
+0.2
+0.0
-0.1
-0.2
stress
PYE with CHIR-090 10 ug/mL
+0.2
-0.0
+0.1
-0.2
-0.0
stress
PYE with CHIR-090 10 ug/mL
+0.0
+0.5
-0.1
-0.2
-0.1
stress
PYE with CHIR-090 40 ug/mL
+0.3
+0.1
-0.1
-0.1
-0.0
no stress control
PYE no stress control
+0.4
+0.0
-0.1
+0.0
-0.1
stress
PYE with CHIR-090 40 ug/mL
+0.1
+0.4
+0.0
-0.2
-0.0
stress
PYE with CHIR-090 10 ug/mL
+0.1
+0.5
-0.1
+0.1
+0.0
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
+0.5
+0.1
+0.1
-0.0
-0.1
stress
PYE with CHIR-090 4 ug/mL
+0.3
+0.4
+0.1
-0.1
-0.0
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.8
+0.2
+0.1
-0.1
-0.1
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