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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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Top 15 experiments (either direction), sorted by average fitness
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500 nt
CCNA_03020 and CCNA_03021 are separated by 9 nucleotides
CCNA_03021 and CCNA_03022 overlap by 31 nucleotides
CCNA_03022 and CCNA_03023 overlap by 91 nucleotides
CCNA_03023 and CCNA_03024 are separated by 220 nucleotides
CCNA_03020: CCNA_03020 - phosphatidylinositol-specific phospholipase C1-like protein, at 3,174,508 to 3,175,635
_03020
CCNA_03021: CCNA_03021 - hypothetical protein, at 3,175,645 to 3,175,857
_03021
CCNA_03022: CCNA_03022 - PiuB-family transmembrane transporter, at 3,175,827 to 3,177,011
_03022
CCNA_03023: CCNA_03023 - TonB-dependent receptor, at 3,176,921 to 3,179,086
_03023
CCNA_03024: CCNA_03024 - branched-chain amino acid aminotransferase, at 3,179,307 to 3,180,197
_03024
Group
Condition
CCNA
_03020
CCNA
_03021
CCNA
_03022
CCNA
_03023
CCNA
_03024
stress
PYE with CHIR-090 10 ug/mL
-0.1
-0.7
+0.0
-0.1
-0.2
stress
PYE with CHIR-090 10 ug/mL
+0.0
-0.9
+0.1
+0.0
-0.1
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
+0.0
-0.8
+0.0
+0.2
-0.1
stress
PYE with CHIR-090 40 ug/mL
+0.1
-1.0
+0.0
+0.2
+0.1
no stress control
PYE no stress control
+0.0
-0.5
+0.1
+0.1
-0.1
no stress control
PYE no stress control
-0.1
+0.4
-0.1
-0.1
-0.2
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.2
-0.8
+0.2
+0.3
+0.1
no stress control
PYE no stress control
+0.1
-0.2
+0.1
+0.1
-0.0
stress
PYE with CHIR-090 4 ug/mL
+0.0
+0.0
-0.1
+0.2
+0.1
stress
PYE with CHIR-090 4 ug/mL
+0.1
-0.4
+0.3
+0.1
+0.1
stress
PYE with CHIR-090 10 ug/mL
+0.1
-0.1
+0.2
+0.1
+0.0
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.2
-0.1
+0.1
+0.3
-0.0
stress
PYE with CHIR-090 4 ug/mL
+0.1
+0.3
+0.3
+0.1
+0.1
stress
PYE with CHIR-090 40 ug/mL
+0.1
+0.6
+0.0
+0.2
+0.0
stress
PYE with CHIR-090 40 ug/mL
-0.1
+0.9
+0.3
+0.3
+0.3
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