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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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Top 15 experiments (either direction), sorted by average fitness
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500 nt
CCNA_02974 and CCNA_02975 are separated by 29 nucleotides
CCNA_02975 and CCNA_02976 are separated by 150 nucleotides
CCNA_02976 and CCNA_02977 are separated by 224 nucleotides
CCNA_02977 and CCNA_02978 are separated by 246 nucleotides
CCNA_02974: CCNA_02974 - toxin protein relE-3, at 3,129,098 to 3,129,376
_02974
CCNA_02975: CCNA_02975 - excinuclease ABC subunit C, at 3,129,406 to 3,131,328
_02975
CCNA_02976: CCNA_02976 - MCP-signal associated domain protein, at 3,131,479 to 3,131,838
_02976
CCNA_02977: CCNA_02977 - RNA polymerase ECF-type sigma factor sigU, at 3,132,063 to 3,132,632
_02977
CCNA_02978: CCNA_02978 - two-component sensor histidine kinase, at 3,132,879 to 3,134,357
_02978
Group
Condition
CCNA
_02974
CCNA
_02975
CCNA
_02976
CCNA
_02977
CCNA
_02978
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.4
+0.1
-0.0
-0.2
-0.1
stress
PYE with CHIR-090 4 ug/mL
-0.4
-0.0
+0.1
-0.3
-0.0
no stress control
PYE no stress control
-0.3
-0.1
+0.0
-0.2
-0.1
stress
PYE with CHIR-090 4 ug/mL
-0.3
-0.0
+0.3
-0.1
-0.1
stress
PYE with CHIR-090 10 ug/mL
-0.4
+0.3
+0.1
-0.2
-0.0
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.3
+0.0
+0.3
-0.1
-0.1
no stress control
PYE no stress control
-0.1
-0.1
+0.2
-0.1
-0.0
stress
PYE with CHIR-090 4 ug/mL
-0.3
+0.0
+0.2
-0.1
-0.1
no stress control
PYE no stress control
-0.2
-0.1
+0.3
-0.1
-0.0
stress
PYE with CHIR-090 40 ug/mL
-0.2
+0.0
+0.2
-0.1
-0.1
stress
PYE with CHIR-090 40 ug/mL
-0.1
+0.1
-0.1
-0.0
-0.0
stress
PYE with CHIR-090 10 ug/mL
-0.2
+0.0
+0.2
-0.1
-0.1
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
-0.2
+0.1
+0.2
-0.1
+0.0
stress
PYE with CHIR-090 10 ug/mL
-0.4
+0.3
+0.4
-0.1
+0.0
stress
PYE with CHIR-090 40 ug/mL
-0.2
+0.0
+0.5
-0.0
-0.0
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