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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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Top 15 experiments (either direction), sorted by average fitness
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500 nt
CCNA_02836 and CCNA_02837 are separated by 16 nucleotides
CCNA_02837 and CCNA_02838 are separated by 26 nucleotides
CCNA_02838 and CCNA_02839 are separated by 277 nucleotides
CCNA_02839 and CCNA_02840 are separated by 118 nucleotides
CCNA_02836: CCNA_02836 - hypothetical protein, at 2,989,564 to 2,990,016
_02836
CCNA_02837: CCNA_02837 - RNA polymerase ECF-type sigma factor, at 2,990,033 to 2,990,593
_02837
CCNA_02838: CCNA_02838 - EF hand domain protein, at 2,990,620 to 2,991,021
_02838
CCNA_02839: CCNA_02839 - glutamate-ammonia-ligase adenylyltransferase, at 2,991,299 to 2,994,175
_02839
CCNA_02840: CCNA_02840 - MecR1 antirepressor protein, at 2,994,294 to 2,995,181
_02840
Group
Condition
CCNA
_02836
CCNA
_02837
CCNA
_02838
CCNA
_02839
CCNA
_02840
stress
PYE with CHIR-090 40 ug/mL
-0.5
+0.1
-0.4
-0.1
+0.1
stress
PYE with CHIR-090 10 ug/mL
-0.2
-0.4
-0.2
+0.0
+0.2
stress
PYE with CHIR-090 40 ug/mL
-0.4
-0.1
+0.1
-0.1
+0.1
no stress control
PYE no stress control
+0.1
-0.3
-0.3
-0.1
+0.2
stress
PYE with CHIR-090 4 ug/mL
-0.2
-0.0
-0.3
-0.0
+0.1
stress
PYE with CHIR-090 10 ug/mL
-0.2
+0.2
-0.4
-0.1
+0.2
stress
PYE with CHIR-090 4 ug/mL
+0.0
-0.1
-0.0
-0.0
+0.1
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.2
+0.2
+0.1
-0.1
+0.0
no stress control
PYE no stress control
-0.2
+0.1
+0.1
-0.1
+0.1
stress
PYE with CHIR-090 4 ug/mL
+0.3
-0.1
-0.2
-0.1
+0.2
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
+0.1
-0.0
+0.2
-0.1
+0.2
no stress control
PYE no stress control
+0.1
+0.2
+0.1
-0.0
+0.1
stress
PYE with CHIR-090 40 ug/mL
+0.3
-0.0
+0.1
+0.0
+0.1
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.4
+0.1
-0.1
+0.1
+0.3
stress
PYE with CHIR-090 10 ug/mL
+0.3
+0.4
-0.0
+0.0
+0.3
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