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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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500 nt
CCNA_02545 and CCNA_02546 are separated by 106 nucleotides
CCNA_02546 and CCNA_02547 overlap by 4 nucleotides
CCNA_02547 and CCNA_02548 are separated by 121 nucleotides
CCNA_02548 and CCNA_02549 overlap by 4 nucleotides
CCNA_02545: CCNA_02545 - alkaline phosphatase, at 2,692,800 to 2,694,473
_02545
CCNA_02546: CCNA_02546 - GGDEF/response regulator protein PleD, at 2,694,580 to 2,695,944
_02546
CCNA_02547: CCNA_02547 - response regulator receiver protein DivK, at 2,695,941 to 2,696,318
_02547
CCNA_02548: CCNA_02548 - hypothetical protein, at 2,696,440 to 2,697,087
_02548
CCNA_02549: CCNA_02549 - glucokinase, at 2,697,084 to 2,697,974
_02549
Group
Condition
CCNA
_02545
CCNA
_02546
CCNA
_02547
CCNA
_02548
CCNA
_02549
stress
PYE with CHIR-090 10 ug/mL
+0.1
+0.0
N.D.
-0.2
+0.2
stress
PYE with CHIR-090 40 ug/mL
+0.2
-0.1
N.D.
-0.0
+0.0
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.2
+0.1
N.D.
-0.1
+0.0
no stress control
PYE no stress control
+0.2
-0.0
N.D.
-0.2
+0.3
no stress control
PYE no stress control
+0.1
+0.2
N.D.
-0.1
+0.0
stress
PYE with CHIR-090 4 ug/mL
+0.2
+0.0
N.D.
-0.0
+0.1
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.2
+0.0
N.D.
+0.0
+0.1
stress
PYE with CHIR-090 40 ug/mL
+0.1
+0.1
N.D.
+0.0
+0.2
stress
PYE with CHIR-090 10 ug/mL
+0.2
+0.1
N.D.
-0.0
+0.1
stress
PYE with CHIR-090 40 ug/mL
+0.2
+0.1
N.D.
-0.0
+0.2
stress
PYE with CHIR-090 10 ug/mL
+0.3
-0.0
N.D.
-0.0
+0.3
stress
PYE with CHIR-090 4 ug/mL
+0.2
+0.2
N.D.
-0.1
+0.3
stress
PYE with CHIR-090 4 ug/mL
+0.3
+0.0
N.D.
+0.1
+0.3
no stress control
PYE no stress control
+0.2
+0.2
N.D.
+0.0
+0.2
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
+0.2
+0.1
N.D.
-0.0
+0.4
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