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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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Top 15 experiments (either direction), sorted by average fitness
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500 nt
CCNA_02406 and CCNA_02407 overlap by 4 nucleotides
CCNA_02407 and CCNA_02408 are separated by 70 nucleotides
CCNA_02408 and CCNA_02409 are separated by 153 nucleotides
CCNA_02409 and CCNA_02410 are separated by 145 nucleotides
CCNA_02406: CCNA_02406 - membrane lipoprotein, at 2,549,249 to 2,549,899
_02406
CCNA_02407: CCNA_02407 - hydrolase, nudix family, at 2,549,896 to 2,550,660
_02407
CCNA_02408: CCNA_02408 - hypothetical protein, at 2,550,731 to 2,551,864
_02408
CCNA_02409: CCNA_02409 - hybrid sensor histidine kinase/receiver protein, at 2,552,018 to 2,553,811
_02409
CCNA_02410: CCNA_02410 - alpha-methylacyl-CoA racemase, at 2,553,957 to 2,555,147
_02410
Group
Condition
CCNA
_02406
CCNA
_02407
CCNA
_02408
CCNA
_02409
CCNA
_02410
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
-0.2
-0.2
+0.2
-0.0
+0.1
no stress control
PYE no stress control
-0.0
-0.2
+0.1
+0.1
+0.0
stress
PYE with CHIR-090 10 ug/mL
+0.1
+0.0
+0.2
+0.1
-0.2
stress
PYE with CHIR-090 40 ug/mL
+0.2
-0.1
+0.1
+0.0
+0.0
stress
PYE with CHIR-090 4 ug/mL
+0.2
-0.1
+0.1
+0.1
-0.0
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.0
-0.1
+0.3
+0.0
+0.1
no stress control
PYE no stress control
+0.1
-0.1
+0.2
+0.1
+0.0
stress
PYE with CHIR-090 4 ug/mL
+0.2
-0.1
-0.0
+0.1
+0.1
stress
PYE with CHIR-090 10 ug/mL
+0.3
-0.1
+0.2
-0.0
+0.0
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.1
-0.1
+0.3
+0.1
+0.0
no stress control
PYE no stress control
+0.1
+0.0
+0.2
+0.1
-0.0
stress
PYE with CHIR-090 40 ug/mL
+0.2
-0.1
+0.2
+0.0
+0.1
stress
PYE with CHIR-090 10 ug/mL
+0.2
-0.0
+0.1
+0.0
+0.2
stress
PYE with CHIR-090 4 ug/mL
+0.0
-0.1
+0.3
+0.1
+0.3
stress
PYE with CHIR-090 40 ug/mL
+0.2
+0.1
+0.1
+0.2
+0.1
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