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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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Top 15 experiments (either direction), sorted by average fitness
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500 nt
CCNA_02330 and CCNA_02331 overlap by 16 nucleotides
CCNA_02331 and CCNA_02332 are separated by 135 nucleotides
CCNA_02332 and CCNA_02333 overlap by 4 nucleotides
CCNA_02333 and CCNA_02334 are separated by 117 nucleotides
CCNA_02330: CCNA_02330 - hypothetical protein, at 2,472,776 to 2,472,991
_02330
CCNA_02331: CCNA_02331 - peptidoglycan-specific endopeptidase, M23 family, at 2,472,976 to 2,473,827
_02331
CCNA_02332: CCNA_02332 - chemotaxis receiver protein cheYIII, at 2,473,963 to 2,474,481
_02332
CCNA_02333: CCNA_02333 - lipid A biosynthesis lauroyl acyltransferase, at 2,474,478 to 2,475,422
_02333
CCNA_02334: CCNA_02334 - transcriptional regulator of stalk biogenesis staR, at 2,475,540 to 2,475,935
_02334
Group
Condition
CCNA
_02330
CCNA
_02331
CCNA
_02332
CCNA
_02333
CCNA
_02334
stress
PYE with CHIR-090 10 ug/mL
-0.5
-0.3
+0.3
-0.5
+0.1
stress
PYE with CHIR-090 4 ug/mL
-0.0
+0.1
+0.0
-1.0
+0.1
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.2
+0.1
+0.1
-1.2
+0.1
stress
PYE with CHIR-090 4 ug/mL
+0.1
+0.1
+0.1
-1.0
+0.2
stress
PYE with CHIR-090 40 ug/mL
+0.3
-0.1
-0.1
-0.4
+0.0
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
-0.0
+0.2
+0.4
-0.8
+0.0
no stress control
PYE no stress control
+0.2
+0.1
+0.1
-0.3
-0.1
stress
PYE with CHIR-090 10 ug/mL
+0.2
+0.1
+0.2
-0.2
-0.0
stress
PYE with CHIR-090 40 ug/mL
+0.3
+0.2
+0.1
-0.2
-0.1
stress
PYE with CHIR-090 40 ug/mL
+0.3
+0.1
+0.1
+0.0
-0.0
no stress control
PYE no stress control
+0.1
+0.2
+0.3
+0.0
-0.1
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.3
+0.3
+0.4
-0.1
-0.0
stress
PYE with CHIR-090 4 ug/mL
+0.6
+0.4
+0.3
-0.4
+0.1
no stress control
PYE no stress control
+0.3
+0.5
+0.1
+0.1
+0.1
stress
PYE with CHIR-090 10 ug/mL
+0.5
+0.1
+0.5
+0.1
-0.2
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