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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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500 nt
CCNA_03895 and CCNA_01873 are separated by 8 nucleotides
CCNA_01873 and CCNA_01874 are separated by 293 nucleotides
CCNA_01874 and CCNA_01875 are separated by 624 nucleotides
CCNA_01875 and CCNA_01876 are separated by 62 nucleotides
CCNA_03895: CCNA_03895 - hypothetical protein, at 2,009,954 to 2,010,232
_03895
CCNA_01873: CCNA_01873 - magnesium and cobalt transport protein corA, at 2,010,241 to 2,010,474
_01873
CCNA_01874: CCNA_01874 - transposase, at 2,010,768 to 2,012,213
_01874
CCNA_01875: CCNA_01875 - acyl-CoA dehydrogenase, short-chain specific, at 2,012,838 to 2,013,983
_01875
CCNA_01876: CCNA_01876 - oxidoreductase, at 2,014,046 to 2,015,716
_01876
Group
Condition
CCNA
_03895
CCNA
_01873
CCNA
_01874
CCNA
_01875
CCNA
_01876
no stress control
PYE no stress control
-0.3
-2.5
N.D.
-0.5
-0.5
stress
PYE with CHIR-090 10 ug/mL
-0.1
-1.7
N.D.
-0.8
-0.5
stress
PYE with CHIR-090 4 ug/mL
-0.6
-1.0
N.D.
-0.4
-0.9
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.7
-0.7
N.D.
-0.8
-0.7
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.8
-1.0
N.D.
-0.6
-0.2
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
-0.4
-1.0
N.D.
-0.5
-0.6
stress
PYE with CHIR-090 4 ug/mL
-0.5
-0.7
N.D.
-0.4
-0.8
stress
PYE with CHIR-090 10 ug/mL
-0.4
-0.4
N.D.
-0.8
-0.7
stress
PYE with CHIR-090 40 ug/mL
-0.4
-0.3
N.D.
-0.5
-0.9
stress
PYE with CHIR-090 40 ug/mL
-0.4
-0.4
N.D.
-0.3
-0.9
stress
PYE with CHIR-090 40 ug/mL
-0.3
-0.3
N.D.
-0.4
-0.6
no stress control
PYE no stress control
-0.4
-0.1
N.D.
-0.5
-0.6
stress
PYE with CHIR-090 10 ug/mL
-0.7
+0.5
N.D.
-0.3
-0.7
no stress control
PYE no stress control
-0.4
+0.3
N.D.
-0.2
-0.8
stress
PYE with CHIR-090 4 ug/mL
-0.3
+0.4
N.D.
-0.4
-0.5
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