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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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Top 15 experiments (either direction), sorted by average fitness
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500 nt
CCNA_01826 and CCNA_01827 are separated by 65 nucleotides
CCNA_01827 and CCNA_01828 overlap by 4 nucleotides
CCNA_01828 and CCNA_01829 are separated by 150 nucleotides
CCNA_01829 and CCNA_01830 are separated by 134 nucleotides
CCNA_01826: CCNA_01826 - vitamin B12 receptor, at 1,951,298 to 1,953,250
_01826
CCNA_01827: CCNA_01827 - cobyric acid synthase CobQ, at 1,953,316 to 1,954,770
_01827
CCNA_01828: CCNA_01828 - hypothetical protein, at 1,954,767 to 1,955,342
_01828
CCNA_01829: CCNA_01829 - SalR-family ligand-binding transcriptional regulator, at 1,955,493 to 1,956,539
_01829
CCNA_01830: CCNA_01830 - TonB-dependent receptor, at 1,956,674 to 1,959,535
_01830
Group
Condition
CCNA
_01826
CCNA
_01827
CCNA
_01828
CCNA
_01829
CCNA
_01830
stress
PYE with CHIR-090 4 ug/mL
-0.3
+0.1
+0.2
-0.1
-0.5
no stress control
PYE no stress control
-0.2
+0.3
+0.2
-0.1
-0.5
stress
PYE with CHIR-090 40 ug/mL
-0.0
-0.0
+0.3
+0.1
-0.5
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.0
+0.2
+0.2
+0.0
-0.4
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.1
+0.2
+0.3
+0.2
-0.5
no stress control
PYE no stress control
-0.0
+0.2
+0.3
+0.2
-0.4
stress
PYE with CHIR-090 4 ug/mL
-0.0
+0.2
+0.2
+0.2
-0.4
stress
PYE with CHIR-090 10 ug/mL
-0.1
+0.3
+0.3
+0.0
-0.3
no stress control
PYE no stress control
-0.1
+0.2
+0.5
+0.1
-0.5
stress
PYE with CHIR-090 10 ug/mL
-0.1
+0.3
+0.1
+0.2
-0.3
stress
PYE with CHIR-090 40 ug/mL
+0.1
+0.2
+0.1
+0.2
-0.3
stress
PYE with CHIR-090 4 ug/mL
-0.0
+0.2
+0.3
+0.2
-0.3
stress
PYE with CHIR-090 40 ug/mL
-0.0
+0.2
+0.5
-0.0
-0.4
stress
PYE with CHIR-090 10 ug/mL
-0.1
+0.2
+0.5
+0.1
-0.4
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
+0.1
+0.2
+0.4
-0.0
-0.3
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