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Cofit
Protein
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Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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Top 15 experiments (either direction), sorted by average fitness
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500 nt
CCNA_01650 and CCNA_01651 are separated by 124 nucleotides
CCNA_01651 and CCNA_01652 are separated by 26 nucleotides
CCNA_01652 and CCNA_01653 are separated by 157 nucleotides
CCNA_01653 and CCNA_01654 overlap by 4 nucleotides
CCNA_01650: CCNA_01650 - copper/zinc superoxide dismutase, at 1,770,655 to 1,771,179
_01650
CCNA_01651: CCNA_01651 - DNA gyrase subunit A, at 1,771,304 to 1,774,063
_01651
CCNA_01652: CCNA_01652 - phosphopantetheine adenylyltransferase, at 1,774,090 to 1,774,581
_01652
CCNA_01653: CCNA_01653 - cyclophilin-type peptidylprolyl cis-trans isomerase, at 1,774,739 to 1,775,572
_01653
CCNA_01654: CCNA_01654 - cyclophilin-type peptidylprolyl cis-trans isomerase, at 1,775,569 to 1,776,417
_01654
Group
Condition
CCNA
_01650
CCNA
_01651
CCNA
_01652
CCNA
_01653
CCNA
_01654
stress
PYE with CHIR-090 4 ug/mL
+0.2
N.D.
N.D.
+0.1
+0.1
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.0
N.D.
N.D.
+0.2
+0.3
stress
PYE with CHIR-090 40 ug/mL
-0.1
N.D.
N.D.
+0.3
+0.3
stress
PYE with CHIR-090 40 ug/mL
-0.0
N.D.
N.D.
+0.3
+0.3
no stress control
PYE no stress control
+0.2
N.D.
N.D.
+0.2
+0.2
stress
PYE with CHIR-090 4 ug/mL
+0.0
N.D.
N.D.
+0.3
+0.3
stress
PYE with CHIR-090 4 ug/mL
+0.0
N.D.
N.D.
+0.3
+0.2
stress
PYE with CHIR-090 40 ug/mL
+0.2
N.D.
N.D.
+0.3
+0.2
no stress control
PYE no stress control
-0.1
N.D.
N.D.
+0.4
+0.3
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.0
N.D.
N.D.
+0.3
+0.3
stress
PYE with CHIR-090 10 ug/mL
+0.2
N.D.
N.D.
+0.3
+0.2
no stress control
PYE no stress control
+0.2
N.D.
N.D.
+0.2
+0.3
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
+0.2
N.D.
N.D.
+0.2
+0.4
stress
PYE with CHIR-090 10 ug/mL
+0.2
N.D.
N.D.
+0.4
+0.3
stress
PYE with CHIR-090 10 ug/mL
+0.7
N.D.
N.D.
+0.1
+0.4
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