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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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Top 15 experiments (either direction), sorted by average fitness
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500 nt
CCNA_R0037 and CCNA_01451 are separated by 172 nucleotides
CCNA_01451 and CCNA_01452 overlap by 32 nucleotides
CCNA_01452 and CCNA_R0038 are separated by 64 nucleotides
CCNA_R0038 and CCNA_01453 are separated by 26 nucleotides
CCNA_R0037: CCNA_R0037 - tRNA-Glu, at 1,564,996 to 1,565,070
_R0037
CCNA_01451: CCNA_01451 - cold shock protein cspD, at 1,565,243 to 1,565,833
_01451
CCNA_01452: CCNA_01452 - hypothetical protein, at 1,565,802 to 1,566,356
_01452
CCNA_R0038: CCNA_R0038 - tRNA-Pro, at 1,566,421 to 1,566,497
_R0038
CCNA_01453: CCNA_01453 - electron transport complex I subunit, NADH-ubiquinone oxidoreductase, at 1,566,524 to 1,566,829
_01453
Group
Condition
CCNA
_R0037
CCNA
_01451
CCNA
_01452
CCNA
_R0038
CCNA
_01453
stress
PYE with CHIR-090 40 ug/mL
-1.7
-0.1
+0.1
N.D.
+0.2
stress
PYE with CHIR-090 10 ug/mL
-0.7
-0.3
+0.4
N.D.
-0.6
stress
PYE with CHIR-090 10 ug/mL
-0.9
+0.0
-0.0
N.D.
-0.1
stress
PYE with CHIR-090 4 ug/mL
-0.3
-0.2
+0.2
N.D.
-0.1
stress
PYE with CHIR-090 10 ug/mL
-0.7
+0.0
+0.4
N.D.
-0.1
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.4
-0.1
+0.1
N.D.
+0.1
no stress control
PYE no stress control
-0.4
-0.1
+0.4
N.D.
+0.0
no stress control
PYE no stress control
-0.4
-0.1
+0.2
N.D.
+0.1
stress
PYE with CHIR-090 40 ug/mL
+0.0
+0.1
+0.2
N.D.
-0.2
stress
PYE with CHIR-090 40 ug/mL
-0.3
-0.2
+0.2
N.D.
+0.6
no stress control
PYE no stress control
-0.0
-0.2
+0.3
N.D.
+0.1
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.1
-0.0
+0.1
N.D.
+0.2
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
+0.1
-0.2
+0.2
N.D.
+0.3
stress
PYE with CHIR-090 4 ug/mL
+0.1
-0.0
+0.1
N.D.
+0.3
stress
PYE with CHIR-090 4 ug/mL
+1.0
-0.1
-0.2
N.D.
+0.2
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