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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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Top 15 experiments (either direction), sorted by average fitness
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500 nt
CCNA_01443 and CCNA_01444 are separated by 87 nucleotides
CCNA_01444 and CCNA_01445 are separated by 89 nucleotides
CCNA_01445 and CCNA_01446 are separated by 108 nucleotides
CCNA_01446 and CCNA_01447 are separated by 36 nucleotides
CCNA_01443: CCNA_01443 - hypothetical protein, at 1,554,869 to 1,555,501
_01443
CCNA_01444: CCNA_01444 - poly(3-hydroxyalkanoate) polymerase, at 1,555,589 to 1,557,607
_01444
CCNA_01445: CCNA_01445 - hypothetical protein, at 1,557,697 to 1,558,137
_01445
CCNA_01446: CCNA_01446 - LL-diaminopimelate aminotransferase, at 1,558,246 to 1,559,466
_01446
CCNA_01447: CCNA_01447 - homoserine dehydrogenase, at 1,559,503 to 1,560,792
_01447
Group
Condition
CCNA
_01443
CCNA
_01444
CCNA
_01445
CCNA
_01446
CCNA
_01447
stress
PYE with CHIR-090 10 ug/mL
+0.2
-0.4
-0.7
-0.1
N.D.
stress
PYE with CHIR-090 10 ug/mL
+0.1
-0.3
-0.4
+0.1
N.D.
stress
PYE with CHIR-090 10 ug/mL
+0.2
-0.2
-0.6
+0.0
N.D.
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
+0.2
-0.3
-0.3
+0.0
N.D.
stress
PYE with CHIR-090 40 ug/mL
+0.0
-0.2
-0.0
-0.0
N.D.
stress
PYE with CHIR-090 4 ug/mL
+0.3
-0.2
-0.2
-0.0
N.D.
no stress control
PYE no stress control
+0.1
-0.5
+0.3
-0.0
N.D.
no stress control
PYE no stress control
+0.2
-0.1
-0.1
-0.0
N.D.
stress
PYE with CHIR-090 4 ug/mL
+0.1
-0.1
+0.1
-0.1
N.D.
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.1
-0.1
-0.0
+0.0
N.D.
no stress control
PYE no stress control
+0.1
-0.2
+0.2
+0.1
N.D.
stress
PYE with CHIR-090 4 ug/mL
+0.0
-0.2
+0.0
+0.2
N.D.
stress
PYE with CHIR-090 40 ug/mL
+0.3
-0.2
+0.1
+0.0
N.D.
stress
PYE with CHIR-090 40 ug/mL
+0.4
-0.2
+0.0
+0.1
N.D.
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.3
-0.2
+0.2
+0.2
N.D.
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