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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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Top 15 experiments (either direction), sorted by average fitness
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500 nt
CCNA_01425 and CCNA_01426 are separated by 90 nucleotides
CCNA_01426 and CCNA_01427 are separated by 265 nucleotides
CCNA_01427 and CCNA_01429 are separated by 121 nucleotides
CCNA_01429 and CCNA_01430 overlap by 16 nucleotides
CCNA_01425: CCNA_01425 - H+ translocating pyrophosphatase, at 1,541,409 to 1,543,547
_01425
CCNA_01426: CCNA_01426 - chemotaxis receiver domain protein cheYIII, at 1,543,638 to 1,544,192
_01426
CCNA_01427: CCNA_01427 - beta-barrel assembly machine (BAM) protein BamE, at 1,544,458 to 1,544,940
_01427
CCNA_01429: CCNA_01429 - ubiquinol-cytochrome C reductase chaperone, at 1,545,062 to 1,545,592
_01429
CCNA_01430: CCNA_01430 - hypothetical protein, at 1,545,577 to 1,546,116
_01430
Group
Condition
CCNA
_01425
CCNA
_01426
CCNA
_01427
CCNA
_01429
CCNA
_01430
stress
PYE with CHIR-090 40 ug/mL
+0.1
+0.2
N.D.
-0.1
-2.0
stress
PYE with CHIR-090 10 ug/mL
+0.0
-0.1
N.D.
-0.2
-1.6
stress
PYE with CHIR-090 10 ug/mL
+0.0
+0.0
N.D.
-0.1
-1.6
stress
PYE with CHIR-090 40 ug/mL
+0.1
-0.0
N.D.
-0.1
-1.3
stress
PYE with CHIR-090 10 ug/mL
+0.3
+0.1
N.D.
-0.1
-1.4
stress
PYE with CHIR-090 4 ug/mL
+0.2
-0.1
N.D.
+0.0
-1.2
no stress control
PYE no stress control
+0.1
+0.2
N.D.
-0.1
-1.1
stress
PYE with CHIR-090 4 ug/mL
+0.2
+0.0
N.D.
+0.1
-1.2
no stress control
PYE no stress control
+0.1
+0.1
N.D.
+0.0
-0.8
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
+0.1
+0.1
N.D.
+0.1
-0.8
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.2
+0.1
N.D.
+0.0
-0.7
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.1
+0.0
N.D.
+0.1
-0.5
stress
PYE with CHIR-090 4 ug/mL
+0.2
+0.2
N.D.
+0.1
-0.5
stress
PYE with CHIR-090 40 ug/mL
+0.1
+0.1
N.D.
+0.0
+0.4
no stress control
PYE no stress control
+0.1
+0.4
N.D.
+0.2
+0.1
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