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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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500 nt
CCNA_01379 and CCNA_01380 are separated by 128 nucleotides
CCNA_01380 and CCNA_01381 are separated by 126 nucleotides
CCNA_01381 and CCNA_01382 are separated by 294 nucleotides
CCNA_01382 and CCNA_01383 are separated by 4 nucleotides
CCNA_01379: CCNA_01379 - type I secretion outer membrane protein rsaFb, at 1,493,232 to 1,494,683
_01379
CCNA_01380: CCNA_01380 - pole-organizing protein popZ, at 1,494,812 to 1,495,345
_01380
CCNA_01381: CCNA_01381 - valyl-tRNA synthetase, at 1,495,472 to 1,498,192
_01381
CCNA_01382: CCNA_01382 - long-chain-fatty-acid--CoA ligase, at 1,498,487 to 1,500,238
_01382
CCNA_01383: CCNA_01383 - hypothetical protein, at 1,500,243 to 1,500,605
_01383
Group
Condition
CCNA
_01379
CCNA
_01380
CCNA
_01381
CCNA
_01382
CCNA
_01383
stress
PYE with CHIR-090 10 ug/mL
-0.1
N.D.
N.D.
-0.2
-0.3
no stress control
PYE no stress control
+0.2
N.D.
N.D.
-0.1
-0.3
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
+0.1
N.D.
N.D.
-0.0
-0.2
stress
PYE with CHIR-090 40 ug/mL
+0.1
N.D.
N.D.
-0.2
-0.1
no stress control
PYE no stress control
+0.3
N.D.
N.D.
-0.2
+0.0
no stress control
PYE no stress control
+0.2
N.D.
N.D.
+0.0
-0.0
stress
PYE with CHIR-090 10 ug/mL
+0.4
N.D.
N.D.
-0.0
-0.2
stress
PYE with CHIR-090 4 ug/mL
+0.1
N.D.
N.D.
+0.1
-0.0
stress
PYE with CHIR-090 4 ug/mL
+0.2
N.D.
N.D.
-0.0
+0.1
stress
PYE with CHIR-090 4 ug/mL
+0.3
N.D.
N.D.
+0.1
-0.0
stress
PYE with CHIR-090 40 ug/mL
+0.4
N.D.
N.D.
-0.0
-0.0
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.4
N.D.
N.D.
+0.1
-0.0
stress
PYE with CHIR-090 40 ug/mL
+0.3
N.D.
N.D.
+0.0
+0.3
stress
PYE with CHIR-090 10 ug/mL
+0.6
N.D.
N.D.
+0.1
-0.0
stress
PYE with Dimethyl Sulfoxide 0.4 %
+0.3
N.D.
N.D.
+0.3
+0.3
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