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Cofit
Protein
Homologs
Fitness for 5 genes in
Caulobacter crescentus NA1000 Δfur
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Top 15 experiments (either direction), sorted by average fitness
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500 nt
CCNA_01194 and CCNA_01195 are separated by 150 nucleotides
CCNA_01195 and CCNA_01196 are separated by 139 nucleotides
CCNA_01196 and CCNA_01197 are separated by 51 nucleotides
CCNA_01197 and CCNA_01198 are separated by 197 nucleotides
CCNA_01194: CCNA_01194 - TonB-dependent receptor, at 1,315,500 to 1,317,953
_01194
CCNA_01195: CCNA_01195 - LacI-family transcriptional regulator, at 1,318,104 to 1,319,129
_01195
CCNA_01196: CCNA_01196 - iron-regulated outer membrane virulence protein, at 1,319,269 to 1,321,248
_01196
CCNA_01197: CCNA_01197 - hypothetical protein, at 1,321,300 to 1,321,470
_01197
CCNA_01198: CCNA_01198 - dTDP-4-dehydrorhamnose reductase, at 1,321,668 to 1,322,570
_01198
Group
Condition
CCNA
_01194
CCNA
_01195
CCNA
_01196
CCNA
_01197
CCNA
_01198
stress
PYE with CHIR-090 10 ug/mL
-0.3
+0.0
+0.0
-0.7
-0.0
stress
PYE with Dimethyl Sulfoxide 0.4 vol%
-0.3
+0.2
-0.1
-0.4
+0.0
no stress control
PYE no stress control
-0.3
+0.0
-0.0
+0.3
-0.2
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.3
+0.2
+0.1
+0.4
-0.6
stress
PYE with CHIR-090 4 ug/mL
-0.2
+0.1
+0.1
-0.0
-0.0
stress
PYE with CHIR-090 40 ug/mL
-0.3
-0.0
+0.1
-0.0
+0.2
no stress control
PYE no stress control
-0.3
+0.2
-0.0
+0.2
+0.0
stress
PYE with Dimethyl Sulfoxide 0.4 %
-0.2
+0.2
-0.0
+0.2
-0.1
stress
PYE with CHIR-090 10 ug/mL
-0.3
+0.3
+0.1
+0.1
-0.1
stress
PYE with CHIR-090 4 ug/mL
-0.2
+0.2
+0.0
+0.2
+0.2
no stress control
PYE no stress control
-0.2
+0.3
-0.0
+0.1
+0.3
stress
PYE with CHIR-090 10 ug/mL
-0.4
+0.1
+0.1
+0.6
+0.1
stress
PYE with CHIR-090 4 ug/mL
-0.3
+0.2
+0.0
+0.5
+0.1
stress
PYE with CHIR-090 40 ug/mL
-0.2
+0.1
+0.1
+0.4
+0.3
stress
PYE with CHIR-090 40 ug/mL
-0.2
+0.1
+0.2
-0.1
+0.7
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